Translation

Parent categories	3. Information processing 3.3. Protein synthesis, modification and degradation
Neighbouring categories	3.3.1. Translation 3.3.2. Chaperones/ protein folding 3.3.3. Protein modification 3.3.4. Protein secretion 3.3.5. Proteolysis
Related categories	ribosomal proteins
Overview on the categories (Excel file) All genes and their categories (Excel file)

Genes in this functional category

Ribosomal RNA

• rrnA-16S
• rrnA-23S
• rrnA-5S
• rrnB-16S
• rrnB-23S
• rrnB-5S
• rrnD-16S
• rrnD-23S
• rrnD-5S
• rrnE-16S
• rrnE-23S
• rrnE-5S
• rrnG-16S
• rrnG-23S
• rrnG-5S
• rrnH-16S
• rrnH-23S
• rrnH-5S
• rrnI-16S
• rrnI-23S
• rrnI-5S
• rrnJ-16S
• rrnJ-23S
• rrnJ-5S
• rrnO-16S
• rrnO-23S
• rrnO-5S
• rrnW-16S
• rrnW-23S
• rrnW-5S

rRNA modification and maturation

• cspR
• ksgA
• mrnC
• rimM
• rlmCD
• rluB
• rnc
• rnmV
• rsmG
• yacO
• ypuI
• yqfG
• ysgA

rRNA modification and maturation/ based on similarity

• yabC
• ylbH
• yloM
• yloN
• ypsC
• ytzG
• yydA

Ribosomal proteins

• ctc
• rplA
• rplB
• rplC
• rplD
• rplE
• rplF
• rplI
• rplJ
• rplK
• rplL
• rplM
• rplN
• rplO
• rplP
• rplQ
• rplR
• rplS
• rplT
• rplU
• rplV
• rplW
• rplX
• rpmA
• rpmB
• rpmC
• rpmD
• rpmE
• rpmF
• rpmGA
• rpmGB
• rpmH
• rpmI
• rpmJ
• rpsB
• rpsC
• rpsD
• rpsE
• rpsF
• rpsG
• rpsH
• rpsI
• rpsJ
• rpsK
• rpsL
• rpsM
• rpsN
• rpsO
• rpsP
• rpsQ
• rpsR
• rpsS
• rpsT
• rpsU
• ybxF
• yhzA
• ytiA

Ribosomal protein/ based on similarity

• yfjL
• ylxQ
• ypfD

Ribosome assembly

• cpgA
• engA
• era
• obg
• rbgA
• yqeH
• ysxC

tRNA

• trnA-Ala
• trnA-Ile
• trnB-Ala
• trnB-Arg
• trnB-Asn
• trnB-Asp
• trnB-Glu
• trnB-Gly1
• trnB-Gly2
• trnB-His
• trnB-Ile2
• trnB-Leu1
• trnB-Leu2
• trnB-Lys
• trnB-Met1
• trnB-Met2
• trnB-Met3
• trnB-Phe
• trnB-Pro
• trnB-Ser1
• trnB-Ser2
• trnB-Thr
• trnB-Val
• trnD-Asn
• trnD-Asp
• trnD-Cys
• trnD-Gln
• trnD-Glu
• trnD-Gly
• trnD-His
• trnD-Leu1
• trnD-Leu2
• trnD-Met
• trnD-Phe
• trnD-Ser
• trnD-Thr
• trnD-Trp
• trnD-Tyr
• trnD-Val
• trnE-Arg
• trnE-Asp
• trnE-Gly
• trnE-Met
• trnI-Ala
• trnI-Arg
• trnI-Asn
• trnI-Gly
• trnI-Pro
• trnI-Thr
• trnJ-Ala
• trnJ-Arg
• trnJ-Gly
• trnJ-Leu1
• trnJ-Leu2
• trnJ-Lys
• trnJ-Pro
• trnJ-Thr
• trnJ-Val
• trnO-Ala
• trnO-Ile
• trnQ-Arg
• trnS-Asn
• trnS-Gln
• trnS-Glu
• trnS-Leu1
• trnS-Leu2
• trnS-Lys
• trnS-Ser
• trnSL-Ala1
• trnSL-Arg1
• trnSL-Arg2
• trnSL-Gln1
• trnSL-Gln2
• trnSL-Glu1
• trnSL-Glu2
• trnSL-Gly1
• trnSL-Met1
• trnSL-Ser1
• trnSL-Thr1
• trnSL-Tyr1
• trnSL-Val1
• trnSL-Val2
• trnY-Asp
• trnY-Glu
• trnY-Lys
• trnY-Phe

tRNA modification and maturation

• cca
• fmt
• folD
• gcp
• gidA
• miaA
• nifZ
• queA
• queC
• queD
• queE
• queF
• queG
• rnpA
• rnpB
• rnz
• rph
• tgt
• thdF
• thiI
• tilS
• trmB
• trmD
• trmFO
• trmK
• trmU
• truA
• truB
• yaaJ
• yacF
• ydiC
• yfjN
• ymcB
• yqeV
• ywlC

tRNA modification and maturation/ based on similarity

• yjdI
• yrvO

Aminoacyl-tRNA synthetases

• alaS
• argS
• asnS
• aspS
• cysS
• gatA
• gatB
• gatC
• gltX
• glyQ
• glyS
• hisS
• hisZ
• ileS
• leuS
• lysS
• metS
• pheS
• pheT
• proS
• serS
• thrS
• thrZ
• trpS
• tyrS
• tyrZ
• valS
• ytpR

Translation factors

• efp
• frr
• fusA
• infA
• infB
• infC
• prfA
• prfB
• rbfA
• tsf
• tufA
• ylaG

Translation/ other

• deaD
• def
• map
• mifM
• smpB
• spoVC
• ssrA
• yflG
• ykrB
• yqeL
• yqeT

Translation/ other/ based on similarity

• yabO
• ydiD
• yfjO
• yjbO
• yjcK
• ylxS
• ylyB
• ynaD
• yoaA
• yqeI
• yrvI
• ywkE

Important publications

Alex Rosenberg, Lior Sinai, Yoav Smith, Sigal Ben-Yehuda
Dynamic expression of the translational machinery during Bacillus subtilis life cycle at a single cell level.
PLoS One: 2012, 7(7);e41921
[PubMed:22848659] [WorldCat.org] [DOI] (I p)

Gene-Wei Li, Eugene Oh, Jonathan S Weissman
The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria.
Nature: 2012, 484(7395);538-41
[PubMed:22456704] [WorldCat.org] [DOI] (I e)