Difference between revisions of "Translation"

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(Created page with " {{CategoryTree |Parents= * 3. Information processing ** 3.3. Protein synthesis, modification and degradation |Neighbours= * 3.3.1. Translation * 3.3.2. [[Chaperones/...")
 
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{{CategoryTree
 
{{CategoryTree
 
|Parents=
 
|Parents=
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* 3.3.5. [[Proteolysis]]
 
* 3.3.5. [[Proteolysis]]
 
|Related=
 
|Related=
−
none
+
* [[ribosomal proteins]]
 +
* [[ribosomal RNA]]
 +
* [[5S rRNA]]
 +
* [[16S rRNA]]
 +
* [[23S rRNA]]
 
|}}
 
|}}
 +
 +
== Genes in this functional category ==
 +
 +
=== [[Ribosomal RNA]]===
 +
* ''[[rrnA-16S]]''
 +
* ''[[rrnA-23S]]''
 +
* ''[[rrnA-5S]]''
 +
* ''[[rrnB-16S]]''
 +
* ''[[rrnB-23S]]''
 +
* ''[[rrnB-5S]]''
 +
* ''[[rrnD-16S]]''
 +
* ''[[rrnD-23S]]''
 +
* ''[[rrnD-5S]]''
 +
* ''[[rrnE-16S]]''
 +
* ''[[rrnE-23S]]''
 +
* ''[[rrnE-5S]]''
 +
* ''[[rrnG-16S]]''
 +
* ''[[rrnG-23S]]''
 +
* ''[[rrnG-5S]]''
 +
* ''[[rrnH-16S]]''
 +
* ''[[rrnH-23S]]''
 +
* ''[[rrnH-5S]]''
 +
* ''[[rrnI-16S]]''
 +
* ''[[rrnI-23S]]''
 +
* ''[[rrnI-5S]]''
 +
* ''[[rrnJ-16S]]''
 +
* ''[[rrnJ-23S]]''
 +
* ''[[rrnJ-5S]]''
 +
* ''[[rrnO-16S]]''
 +
* ''[[rrnO-23S]]''
 +
* ''[[rrnO-5S]]''
 +
* ''[[rrnW-16S]]''
 +
* ''[[rrnW-23S]]''
 +
* ''[[rrnW-5S]]''
 +
 +
=== rRNA modification and maturation ===
 +
* ''[[ksgA]]''
 +
* ''[[mrnC]]''
 +
* ''[[rimM]]''
 +
* ''[[rlmCD]]''
 +
* ''[[rluB]]''
 +
* ''[[rnc]]''
 +
* ''[[rnmV]]''
 +
* ''[[rsmG]]''
 +
* ''[[yacO]]''
 +
* ''[[ypuI]]''
 +
* ''[[yqfG]]''
 +
* ''[[ysgA]]''
 +
 +
=== rRNA modification and maturation/ based on similarity ===
 +
* ''[[yabC]]''
 +
* ''[[ylbH]]''
 +
* ''[[ylbN]]''
 +
* ''[[yloM]]''
 +
* ''[[yloN]]''
 +
* ''[[ypsC]]''
 +
* ''[[yrrK]]''
 +
* ''[[ytzG]]''
 +
* ''[[yydA]]''
 +
 +
=== Ribosomal proteins ===
 +
* ''[[ctc]]''
 +
* ''[[rplA]]''
 +
* ''[[rplB]]''
 +
* ''[[rplC]]''
 +
* ''[[rplD]]''
 +
* ''[[rplE]]''
 +
* ''[[rplF]]''
 +
* ''[[rplI]]''
 +
* ''[[rplJ]]''
 +
* ''[[rplK]]''
 +
* ''[[rplL]]''
 +
* ''[[rplM]]''
 +
* ''[[rplN]]''
 +
* ''[[rplO]]''
 +
* ''[[rplP]]''
 +
* ''[[rplQ]]''
 +
* ''[[rplR]]''
 +
* ''[[rplS]]''
 +
* ''[[rplT]]''
 +
* ''[[rplU]]''
 +
* ''[[rplV]]''
 +
* ''[[rplW]]''
 +
* ''[[rplX]]''
 +
* ''[[rpmA]]''
 +
* ''[[rpmB]]''
 +
* ''[[rpmC]]''
 +
* ''[[rpmD]]''
 +
* ''[[rpmE]]''
 +
* ''[[rpmF]]''
 +
* ''[[rpmGA]]''
 +
* ''[[rpmGB]]''
 +
* ''[[rpmGC]]''
 +
* ''[[rpmH]]''
 +
* ''[[rpmI]]''
 +
* ''[[rpmJ]]''
 +
* ''[[rpsB]]''
 +
* ''[[rpsC]]''
 +
* ''[[rpsD]]''
 +
* ''[[rpsE]]''
 +
* ''[[rpsF]]''
 +
* ''[[rpsG]]''
 +
* ''[[rpsH]]''
 +
* ''[[rpsI]]''
 +
* ''[[rpsJ]]''
 +
* ''[[rpsK]]''
 +
* ''[[rpsL]]''
 +
* ''[[rpsM]]''
 +
* ''[[rpsN]]''
 +
* ''[[rpsO]]''
 +
* ''[[rpsP]]''
 +
* ''[[rpsQ]]''
 +
* ''[[rpsR]]''
 +
* ''[[rpsS]]''
 +
* ''[[rpsT]]''
 +
* ''[[rpsU]]''
 +
* ''[[ybxF]]''
 +
* ''[[rpsNB]]''
 +
* ''[[rpmEB]]''
 +
 +
=== Ribosomal protein/ based on similarity ===
 +
* ''[[yfjL]]''
 +
* ''[[ylxQ]]''
 +
* ''[[ypfD]]''
 +
 +
=== Ribosome assembly ===
 +
* ''[[cpgA]]''
 +
* ''[[cshA]]''
 +
* ''[[cshB]]''
 +
* ''[[engA]]''
 +
* ''[[era]]''
 +
* ''[[obg]]''
 +
* ''[[prp]]''
 +
* ''[[rbgA]]''
 +
* ''[[yaaA]]''
 +
* ''[[yfmL]]''
 +
* ''[[yqeH]]''
 +
* ''[[ysxC]]''
 +
 +
=== tRNA ===
 +
* ''[[trnA-Ala]]''
 +
* ''[[trnA-Ile]]''
 +
* ''[[trnB-Ala]]''
 +
* ''[[trnB-Arg]]''
 +
* ''[[trnB-Asn]]''
 +
* ''[[trnB-Asp]]''
 +
* ''[[trnB-Glu]]''
 +
* ''[[trnB-Gly1]]''
 +
* ''[[trnB-Gly2]]''
 +
* ''[[trnB-His]]''
 +
* ''[[trnB-Ile2]]''
 +
* ''[[trnB-Leu1]]''
 +
* ''[[trnB-Leu2]]''
 +
* ''[[trnB-Lys]]''
 +
* ''[[trnB-Met1]]''
 +
* ''[[trnB-Met2]]''
 +
* ''[[trnB-Met3]]''
 +
* ''[[trnB-Phe]]''
 +
* ''[[trnB-Pro]]''
 +
* ''[[trnB-Ser1]]''
 +
* ''[[trnB-Ser2]]''
 +
* ''[[trnB-Thr]]''
 +
* ''[[trnB-Val]]''
 +
* ''[[trnD-Asn]]''
 +
* ''[[trnD-Asp]]''
 +
* ''[[trnD-Cys]]''
 +
* ''[[trnD-Gln]]''
 +
* ''[[trnD-Glu]]''
 +
* ''[[trnD-Gly]]''
 +
* ''[[trnD-His]]''
 +
* ''[[trnD-Leu1]]''
 +
* ''[[trnD-Leu2]]''
 +
* ''[[trnD-Met]]''
 +
* ''[[trnD-Phe]]''
 +
* ''[[trnD-Ser]]''
 +
* ''[[trnD-Thr]]''
 +
* ''[[trnD-Trp]]''
 +
* ''[[trnD-Tyr]]''
 +
* ''[[trnD-Val]]''
 +
* ''[[trnE-Arg]]''
 +
* ''[[trnE-Asp]]''
 +
* ''[[trnE-Gly]]''
 +
* ''[[trnE-Met]]''
 +
* ''[[trnI-Ala]]''
 +
* ''[[trnI-Arg]]''
 +
* ''[[trnI-Asn]]''
 +
* ''[[trnI-Gly]]''
 +
* ''[[trnI-Pro]]''
 +
* ''[[trnI-Thr]]''
 +
* ''[[trnJ-Ala]]''
 +
* ''[[trnJ-Arg]]''
 +
* ''[[trnJ-Gly]]''
 +
* ''[[trnJ-Leu1]]''
 +
* ''[[trnJ-Leu2]]''
 +
* ''[[trnJ-Lys]]''
 +
* ''[[trnJ-Pro]]''
 +
* ''[[trnJ-Thr]]''
 +
* ''[[trnJ-Val]]''
 +
* ''[[trnO-Ala]]''
 +
* ''[[trnO-Ile]]''
 +
* ''[[trnQ-Arg]]''
 +
* ''[[trnS-Asn]]''
 +
* ''[[trnS-Gln]]''
 +
* ''[[trnS-Glu]]''
 +
* ''[[trnS-Leu1]]''
 +
* ''[[trnS-Leu2]]''
 +
* ''[[trnS-Lys]]''
 +
* ''[[trnS-Ser]]''
 +
* ''[[trnSL-Ala1]]''
 +
* ''[[trnSL-Arg1]]''
 +
* ''[[trnSL-Arg2]]''
 +
* ''[[trnSL-Gln1]]''
 +
* ''[[trnSL-Gln2]]''
 +
* ''[[trnSL-Glu1]]''
 +
* ''[[trnSL-Glu2]]''
 +
* ''[[trnSL-Gly1]]''
 +
* ''[[trnSL-Met1]]''
 +
* ''[[trnSL-Ser1]]''
 +
* ''[[trnSL-Thr1]]''
 +
* ''[[trnSL-Tyr1]]''
 +
* ''[[trnSL-Val1]]''
 +
* ''[[trnSL-Val2]]''
 +
* ''[[trnY-Asp]]''
 +
* ''[[trnY-Glu]]''
 +
* ''[[trnY-Lys]]''
 +
* ''[[trnY-Phe]]''
 +
 +
=== tRNA modification and maturation ===
 +
* ''[[cca]]''
 +
* ''[[cspR]]''
 +
* ''[[fmt]]''
 +
* ''[[folD]]''
 +
* ''[[gidA]]''
 +
* ''[[miaA]]''
 +
* ''[[mtaB]]''
 +
 +
* ''[[nifZ]]''
 +
* ''[[queA]]''
 +
* ''[[queC]]''
 +
* ''[[queD]]''
 +
* ''[[queE]]''
 +
* ''[[queF]]''
 +
* ''[[queG]]''
 +
* ''[[rnpA]]''
 +
* ''[[rnpB]]''
 +
* ''[[rnz]]''
 +
* ''[[rph]]''
 +
* ''[[tcdA]]''
 +
* ''[[tgt]]''
 +
* ''[[thdF]]''
 +
* ''[[thiI]]''
 +
* ''[[tilS]]''
 +
* ''[[trmB]]''
 +
* ''[[trmD]]''
 +
* ''[[trmFO]]''
 +
* ''[[trmK]]''
 +
* ''[[trmU]]''
 +
* ''[[truA]]''
 +
* ''[[truB]]''
 +
* ''[[tsaB]]''
 +
* ''[[tsaC]]''
 +
* ''[[tsaD]]''
 +
* ''[[tsaE]]''
 +
* ''[[yaaJ]]''
 +
* ''[[yacF]]''
 +
* ''[[yfjN]]''
 +
* ''[[ylbM]]''
 +
* ''[[ymcB]]''
 +
 +
* ''[[yrvO]]''
 +
 +
=== tRNA modification and maturation/ based on similarity ===
 +
* ''[[yjdI]]''
 +
 +
=== Aminoacyl-tRNA synthetases ===
 +
* ''[[alaS]]''
 +
* ''[[argS]]''
 +
* ''[[asnS]]''
 +
* ''[[aspS]]''
 +
* ''[[cysS]]''
 +
* ''[[gatA]]''
 +
* ''[[gatB]]''
 +
* ''[[gatC]]''
 +
* ''[[gltX]]''
 +
* ''[[glyQ]]''
 +
* ''[[glyS]]''
 +
* ''[[hisS]]''
 +
* ''[[hisZ]]''
 +
* ''[[ileS]]''
 +
* ''[[leuS]]''
 +
* ''[[lysS]]''
 +
* ''[[metS]]''
 +
* ''[[pheS]]''
 +
* ''[[pheT]]''
 +
* ''[[proS]]''
 +
* ''[[serS]]''
 +
* ''[[thrS]]''
 +
* ''[[thrZ]]''
 +
* ''[[trpS]]''
 +
* ''[[tyrS]]''
 +
* ''[[tyrZ]]''
 +
* ''[[valS]]''
 +
* ''[[ytpR]]''
 +
 +
==== [http://www.rcsb.org/pdb/101/motm.do?momID=16 Discussion of the structure of aminoacyl-tRNA synthetases] ====
 +
 +
=== Translation factors ===
 +
* ''[[efp]]''
 +
* ''[[frr]]''
 +
* ''[[fusA]]''
 +
* ''[[infA]]''
 +
* ''[[infB]]''
 +
* ''[[infC]]''
 +
* ''[[lepA]]''
 +
* ''[[prfA]]''
 +
* ''[[prfB]]''
 +
* ''[[rbfA]]''
 +
* ''[[tsf]]''
 +
* ''[[tufA]]''
 +
* ''[[ylaG]]''
 +
 +
=== Translation/ other ===
 +
* ''[[deaD]]''
 +
* ''[[defA]]''
 +
* ''[[dtd]]''
 +
* ''[[map]]''
 +
* ''[[mifM]]''
 +
* ''[[smpB]]''
 +
* ''[[spoVC]]''
 +
* ''[[ssrA]]''
 +
* ''[[yflG]]''
 +
* ''[[ynbA]]''
 +
* ''[[yqeL]]''
 +
* ''[[yqeT]]''
 +
 +
=== Translation/ other/ based on similarity ===
 +
* ''[[yabO]]''
 +
* ''[[ydiD]]''
 +
* ''[[yfjO]]''
 +
* ''[[yjbO]]''
 +
* ''[[yjcK]]''
 +
* ''[[ylxS]]''
 +
* ''[[ylyB]]''
 +
* ''[[ynaD]]''
 +
* ''[[yoaA]]''
 +
* ''[[yqeI]]''
 +
* ''[[ywkE]]''
 +
 +
 +
= Important publications=
 +
<pubmed>22456704 22848659 22905870 24809820 24789973 25796611 26518335  28271488</pubmed>
 +
 +
=Back to [[categories]]=

Latest revision as of 09:31, 5 October 2018

Parent categories
Neighbouring categories
Related categories

Genes in this functional category

Ribosomal RNA

rRNA modification and maturation

rRNA modification and maturation/ based on similarity

Ribosomal proteins

Ribosomal protein/ based on similarity

Ribosome assembly

tRNA

tRNA modification and maturation

tRNA modification and maturation/ based on similarity

Aminoacyl-tRNA synthetases

Discussion of the structure of aminoacyl-tRNA synthetases

Translation factors

Translation/ other

Translation/ other/ based on similarity


Important publications


Back to categories

Retrieved from "http://subtiwiki.uni-goettingen.de/wiki//index.php?title=Translation&oldid=210061"