Difference between revisions of "Utilization of specific carbon sources"
(→Utilization of other polymeric carbohydrates) |
(→Utilization of organic acids) |
||
| (19 intermediate revisions by 2 users not shown) | |||
| Line 7: | Line 7: | ||
* 2.2.2. [[Utilization of specific carbon sources]] | * 2.2.2. [[Utilization of specific carbon sources]] | ||
|Related= | |Related= | ||
| − | + | * [[CcpA regulon]] | |
|}} | |}} | ||
| Line 25: | Line 25: | ||
* ''[[dctR]]'' | * ''[[dctR]]'' | ||
* ''[[dctS]]'' | * ''[[dctS]]'' | ||
| + | * ''[[hbuT]]'' | ||
* ''[[lutA]]'' | * ''[[lutA]]'' | ||
* ''[[lutB]]'' | * ''[[lutB]]'' | ||
| Line 30: | Line 31: | ||
* ''[[lutP]]'' | * ''[[lutP]]'' | ||
* ''[[lutR]]'' | * ''[[lutR]]'' | ||
| + | *'' [[lytS]]'' | ||
| + | * ''[[lytT]]'' | ||
* ''[[maeA]]'' | * ''[[maeA]]'' | ||
* ''[[maeN]]'' | * ''[[maeN]]'' | ||
| Line 37: | Line 40: | ||
* ''[[mleA]]'' | * ''[[mleA]]'' | ||
* ''[[mleN]]'' | * ''[[mleN]]'' | ||
| + | * ''[[scoA]]'' | ||
| + | * ''[[scoB]]'' | ||
| + | * ''[[ybaR]]'' | ||
* ''[[yflS]]'' | * ''[[yflS]]'' | ||
* ''[[yoaB]]'' | * ''[[yoaB]]'' | ||
* ''[[yraO]]'' | * ''[[yraO]]'' | ||
| + | * ''[[ysbA]]'' | ||
* ''[[ytsJ]]'' | * ''[[ytsJ]]'' | ||
| + | * ''[[yxjF]]'' | ||
=== Utilization of acetoin === | === Utilization of acetoin === | ||
| Line 48: | Line 56: | ||
* ''[[acoL]]'' | * ''[[acoL]]'' | ||
* ''[[acoR]]'' | * ''[[acoR]]'' | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
=== Utilization of glycerol/ glycerol-3-phosphate === | === Utilization of glycerol/ glycerol-3-phosphate === | ||
| Line 93: | Line 95: | ||
* ''[[araQ]]'' | * ''[[araQ]]'' | ||
* ''[[araR]]'' | * ''[[araR]]'' | ||
| − | |||
=== Utilization of fructose === | === Utilization of fructose === | ||
| Line 128: | Line 129: | ||
* ''[[gutP]]'' | * ''[[gutP]]'' | ||
* ''[[gutR]]'' | * ''[[gutR]]'' | ||
| − | |||
| − | |||
| − | |||
| − | |||
=== Utilization of gluconate === | === Utilization of gluconate === | ||
| Line 181: | Line 178: | ||
* ''[[iolW]]'' | * ''[[iolW]]'' | ||
* ''[[iolX]]'' | * ''[[iolX]]'' | ||
| + | * ''[[yfiG]]'' | ||
=== Utilization of amino sugars === | === Utilization of amino sugars === | ||
| Line 191: | Line 189: | ||
* ''[[gamA]]'' | * ''[[gamA]]'' | ||
* ''[[gamP]]'' | * ''[[gamP]]'' | ||
| + | * ''[[gamR]]'' | ||
* ''[[murP]]'' | * ''[[murP]]'' | ||
* ''[[murQ]]'' | * ''[[murQ]]'' | ||
| Line 197: | Line 196: | ||
* ''[[nagB]]'' | * ''[[nagB]]'' | ||
* ''[[nagP]]'' | * ''[[nagP]]'' | ||
| − | * ''[[ | + | * ''[[nagR]]'' |
* ''[[yurJ]]'' | * ''[[yurJ]]'' | ||
| − | |||
=== Utilization of beta-glucosides === | === Utilization of beta-glucosides === | ||
| Line 262: | Line 260: | ||
* ''[[gmuR]]'' | * ''[[gmuR]]'' | ||
| − | === Utilization of pectin === | + | === Utilization of rhamnose and pectin === |
| + | * ''[[lplD]]'' | ||
| + | * ''[[rhaA]]'' | ||
| + | * ''[[rhaB]]'' | ||
| + | * ''[[rhaEW]]'' | ||
| + | * ''[[rhaM]]'' | ||
| + | * ''[[rhaR]]'' | ||
| + | * ''[[rhiF]]'' | ||
| + | * ''[[rhiG]]'' | ||
| + | * ''[[rhiL]]'' | ||
| + | * ''[[rhiN]]'' | ||
| + | * ''[[rhgR]]'' | ||
* ''[[ybcM]]'' | * ''[[ybcM]]'' | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* ''[[yesT]]'' | * ''[[yesT]]'' | ||
* ''[[yesV]]'' | * ''[[yesV]]'' | ||
| Line 276: | Line 280: | ||
* ''[[yesZ]]'' | * ''[[yesZ]]'' | ||
* ''[[yteR]]'' | * ''[[yteR]]'' | ||
| + | |||
| + | === Utilization of galactan === | ||
| + | * ''[[cycB]]'' | ||
| + | * ''[[ganA]]'' | ||
| + | * ''[[ganB]]'' | ||
| + | *'' [[ganP]]'' | ||
| + | * ''[[ganQ]]'' | ||
| + | * ''[[lacR]]'' | ||
=== Utilization of other polymeric carbohydrates === | === Utilization of other polymeric carbohydrates === | ||
| Line 281: | Line 293: | ||
* ''[[bglS]]'' | * ''[[bglS]]'' | ||
* ''[[csn]]'' | * ''[[csn]]'' | ||
| − | |||
| − | |||
| − | |||
* ''[[levB]]'' | * ''[[levB]]'' | ||
* ''[[levD]]'' | * ''[[levD]]'' | ||
| Line 303: | Line 312: | ||
* ''[[xynC]]'' | * ''[[xynC]]'' | ||
* ''[[xynD]]'' | * ''[[xynD]]'' | ||
| − | |||
* ''[[ysdC]]'' | * ''[[ysdC]]'' | ||
* ''[[ytoP]]'' | * ''[[ytoP]]'' | ||
* ''[[yugT]]'' | * ''[[yugT]]'' | ||
| − | + | ||
| − | + | === Utilization of other pentoses and hexoses=== | |
| − | *'' [[ | + | * ''[[ydaE]]'' |
== Utilization of specific carbon sources in [http://subtiwiki.uni-goettingen.de/subtipathways.html ''Subti''Pathways]: [http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Utilization of different carbon sources]== | == Utilization of specific carbon sources in [http://subtiwiki.uni-goettingen.de/subtipathways.html ''Subti''Pathways]: [http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Utilization of different carbon sources]== | ||
| Line 315: | Line 323: | ||
==Reviews== | ==Reviews== | ||
<pubmed> 11018147 19202299 17982469 </pubmed> | <pubmed> 11018147 19202299 17982469 </pubmed> | ||
| + | =Back to [[categories]]= | ||
Latest revision as of 16:52, 26 September 2016
| Parent categories |
|
| Neighbouring categories |
|
| Related categories | |
Contents
- 1 Genes in this functional category
- 1.1 Utilization of organic acids
- 1.2 Utilization of acetoin
- 1.3 Utilization of glycerol/ glycerol-3-phosphate
- 1.4 Utilization of ribose
- 1.5 Utilization of xylan/ xylose
- 1.6 Utilization of arabinan/ arabinose/ arabitol
- 1.7 Utilization of fructose
- 1.8 Utilization of galactose
- 1.9 Utilization of mannose
- 1.10 Utilization of mannitol
- 1.11 Utilization of glucitol
- 1.12 Utilization of gluconate
- 1.13 Utilization of glucarate/galactarate
- 1.14 Utilization of hexuronate
- 1.15 Utilization of inositol
- 1.16 Utilization of amino sugars
- 1.17 Utilization of beta-glucosides
- 1.18 Utilization of sucrose
- 1.19 Utilization of trehalose
- 1.20 Utilization of melibiose
- 1.21 Utilization of maltose
- 1.22 Utilization of starch/ maltodextrin
- 1.23 Utilization of glucomannan
- 1.24 Utilization of rhamnose and pectin
- 1.25 Utilization of galactan
- 1.26 Utilization of other polymeric carbohydrates
- 1.27 Utilization of other pentoses and hexoses
- 2 Utilization of specific carbon sources in SubtiPathways: Utilization of different carbon sources
- 3 Reviews
- 4 Back to categories
Genes in this functional category
Utilization of organic acids
- acsA
- acuA
- acuC
- cimH
- citH
- citM
- citS
- citT
- dctB
- dctP
- dctR
- dctS
- hbuT
- lutA
- lutB
- lutC
- lutP
- lutR
- lytS
- lytT
- maeA
- maeN
- malK
- malR
- malS
- mleA
- mleN
- scoA
- scoB
- ybaR
- yflS
- yoaB
- yraO
- ysbA
- ytsJ
- yxjF
Utilization of acetoin
Utilization of glycerol/ glycerol-3-phosphate
Utilization of ribose
Utilization of xylan/ xylose
Utilization of arabinan/ arabinose/ arabitol
Utilization of fructose
Utilization of galactose
Utilization of mannose
Utilization of mannitol
Utilization of glucitol
Utilization of gluconate
Utilization of glucarate/galactarate
Utilization of hexuronate
Utilization of inositol
Utilization of amino sugars
Utilization of beta-glucosides
Utilization of sucrose
Utilization of trehalose
Utilization of melibiose
Utilization of maltose
Utilization of starch/ maltodextrin
Utilization of glucomannan
Utilization of rhamnose and pectin
Utilization of galactan
Utilization of other polymeric carbohydrates
- bglC
- bglS
- csn
- levB
- levD
- levE
- levF
- levG
- levR
- licA
- licB
- licC
- licH
- licR
- licT
- pel
- pelB
- pelC
- sacC
- senS
- xynC
- xynD
- ysdC
- ytoP
- yugT
Utilization of other pentoses and hexoses
Utilization of specific carbon sources in SubtiPathways: Utilization of different carbon sources
Reviews
