pelC

pelC
168

pectate lyase C

Locus
BSU_34950
Molecular weight
24.13 kDa
Isoelectric point
9.14
Protein length
221 aaSequenceBlast
Gene length
666 bpSequenceBlast
Function
degradation of polygalacturonic acid
Product
pectate lyase C
Essential
no
E.C.
4.2.2.2
Synonyms
pelC, yvpA
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
3,590,603  3,591,268
The protein
Catalyzed reaction/ biological activity
Eliminative cleavage of (1->4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends (according to UniProt)
Protein family
polysaccharide lyase 3 family (single member, according to UniProt)
Structure
1EE6 (PDB) (from Bacillus sp., 58% identity) PubMed
O34310 (AlphaFold)
Localization
extracellular (signal peptide) PubMed
Expression and Regulation
Operons
Genes
yvpB-pelC
Description
PubMed
Open in new tab

yvpB→pelC

2025-03-26 01:51:23

Jstuelk

74

6f70fbd50aefc530dec3424a93521b29bc4bd1f1

9B6AEABE2297AC3313F1E9D63B1D5AEE8181DA4B

Biological materials
Mutant
MGNA-A382 (yvpA::erm), available at the NBRP B. subtilis, Japan
BKE34950 (pelC::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATGATAAATCCTCCCCGG,  downstream forward: _UP4_TTTTAACAAAAAAAGTCCGC
BKK34950 (pelC::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATGATAAATCCTCCCCGG,  downstream forward: _UP4_TTTTAACAAAAAAAGTCCGC
References
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99ECA1B305145A63BD3A72094EF24F56D875BCC1

Page visits: 4766

Time of last update: 2025-03-31 10:15:54

Author of last update: Melvin.boenninger