Difference between revisions of "Phosphoproteins"
 (→Phosphorylation on a Cys residue: Enzyme IIB components of the PTS)  | 
				 (→Phosphorylation on a Thr residue)  | 
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* [[Pgk]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  | * [[Pgk]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  | ||
* [[PrkC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  | * [[PrkC]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007]  | ||
| + | * [[PrkD]] [http://www.ncbi.nlm.nih.gov/pubmed/20389117 Pietack''et al''., 2010]  | ||
* [[RsbR]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  | * [[RsbR]] [http://www.ncbi.nlm.nih.gov/pubmed/17218307 Macek ''et al''., 2007] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  | ||
* [[RsbRB]] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  | * [[RsbRB]] [http://www.ncbi.nlm.nih.gov/pubmed/17726680 Eymann''et al''., 2007]  | ||
Revision as of 17:47, 21 April 2010
These proteins are subject to a phosphorylation event. Most often, protein phosphorylation affects the conformation of the protein resulting in changes in biological activity and/ or localization.
Contents
- 1 Phosphoproteins in B. subtilis
- 1.1 Phosphorylation on an Arg residue
 - 1.2 Phosphorylation on an Asp residue: Response regulators of two-component systems
 - 1.3 Phosphorylation on a Cys residue: Enzyme IIB components of the PTS
 - 1.4 Phosphorylation on a His residue
 - 1.5 Phosphorylation on a Ser residue
 - 1.6 Phosphorylation on a Thr residue
 - 1.7 Phosphorylation on a Tyr residue
 - 1.8 Phosphorylation on either a Ser, Thr or Tyr residue
 
 - 2 Related Lists
 - 3 Original papers on the B. subtilis phosphoproteome
 - 4 Reviews
 
Phosphoproteins in B. subtilis
Phosphorylation on an Arg residue
Phosphorylation on an Asp residue: Response regulators of two-component systems
- ComA: phosphorylated by ComP
 - DegU: phosphorylated by DegS
 - DesR: phosphorylated by DesK
 - LiaR: phosphorylated by LiaS
 - YdfI: phosphorylated by YdfH
 - YfiK: phosphorylated by YfiJ
 - YhcZ: phosphorylated by YhcY
 - YvfU: phosphorylated by YvfT
 - YxjL: phosphorylated by YxjM
 - BceR: phosphorylated by BceS
 - CssR: phosphorylated by CssS
 - NatR: phosphorylated by NatK
 - PhoP: phosphorylated by PhoR
 - ResD: phosphorylated by ResE
 - WalR: phosphorylated by WalK
 - YbdJ: phosphorylated by YbdK
 - YcbL: phosphorylated by YcbM
 - YclJ: phosphorylated by YclK
 - YkoG: phosphorylated by YkoH
 - YrkP: phosphorylated by YrkO
 - YvcP: phosphorylated by YvcQ
 - YvrHb: phosphorylated by YvrG
 - YxdJ: phosphorylated by YxdK
 - CheY: phosphorylated by CheA
 - CitT: phosphorylated by CitS
 - DctR: phosphorylated by DctS
 - GlnL: phosphorylated by GlnK
 - MalR: phosphorylated by MalK
 - LytT: phosphorylated by LytS
 - YesN: phosphorylated by YesM
 - Spo0F: part of the phosphorelay, phosphorylated by KinA, KinB, KinC, KinD, or KinE
 - Spo0A: part of the phosphorelay, phosphorylated by Spo0B
 
Phosphorylation on a Cys residue: Enzyme IIB components of the PTS
- PtsG: glucose permease, EIICBA: phosphorylated by PtsG-IIA domain
 - GamP: glucosamine permease, EIICBA: phosphorylated by GamP-IIA domain
 - MurP: N-acetyl muramic acid-specific phosphotransferase system, EIIBC: likely phosphorylated by PtsG-IIA domain
 - SacP: sucrose permease (high affinity): phosphorylated by PtsG-IIA domain
 - SacX: sucrose permease (low affinity): phosphorylated by PtsG-IIA domain
 - MtlA: mannitol permease: phosphorylated by MtlF
 - GmuB: galactomannan permease: phosphorylated by GmuA
 - TreP: trehalose permease: phosphorylated by PtsG-IIA domain
 - MalP: maltose permease: likely phosphorylated by PtsG-IIA domain
 - FruA: fructose permease: phosphorylated by FruA-IIA domain
 - ManP: mannose permease: phosphorylated by ManP-IIA domain
 - LicB: lichenan permease: phosphorylated by LicA
 - BglP: ß-glucoside permease: phosphorylated by BglP-IIA domain
 - NagP: N-acetylglucosamine permease: phosphorylated by PtsG-IIA domain
 
Phosphorylation on a His residue
-  PTS proteins
- Enzyme I: autophosphorylated using phosphoenolpyruvate as phosphate donor
 - HPr: phosphorylated by Enzyme I
 - PtsG: glucose permease, EIICBA: phosphorylated by HPr
 - GamP: glucosamine permease, EIICBA: phosphorylated by HPr
 - MtlF: mannitol permease: phosphorylated by HPr
 - GmuA: galactomannan permease: phosphorylated by HPr
 - MalP: maltose permease: phosphorylated by HPr
 - FruA: fructose permease: phosphorylated by HPr
 - ManP: mannose permease: phosphorylated by HPr
 - LevD: fructose permease: phosphorylated by HPr
 - LevE: fructose permease: phosphorylated by LevD
 - LicA: lichenan permease: phosphorylated by HPr
 - BglP: ß-glucoside permease
 - YpqE: unknown EIIA component: phosphorylated by HPr
 - YyzE: truncated PTS IIA protein: might perhaps be phosphorylated by HPr
 
 
-  Non-PTS proteins controlled by PTS-dependent phosphorylation
- GlpK: phosphorylated by HPr
 - GlcT: phosphorylated by HPr and by PtsG
 - LicT: phosphorylated by HPr and likely by BglP
 - SacT: phosphorylated by HPr and likely by SacP
 - SacY: phosphorylated by HPr and likely by SacY
 - LevR: phosphorylated by HPr and by LevE
 - LicR: phosphorylated by HPr and likely by LicB
 - ManR: phosphorylated by HPr and likely by ManP
 - MtlR: phosphorylated by HPr and likely by MtlA
 
 
- Protein kinases of two-component systems (These kinases are dimeric proteins. Phosphorylation occurs from one subunit to the other (not quite an autophosphorylation).)
 
Phosphorylation on a Ser residue
- Crh: phosphorylated by HPrK
 - Hpr: phosphorylated by HPrK
 - AhpF Macek et al., 2007
 - AroA Macek et al., 2007
 - Asd Macek et al., 2007
 - CitZ Macek et al., 2007
 - CodY Macek et al., 2007
 - DegS Macek et al., 2007
 - DhbC Macek et al., 2007
 - DhbF Macek et al., 2007
 - Eno Macek et al., 2007
 - FusA Macek et al., 2007
 - GlmM Macek et al., 2007 Eymannet al., 2007
 - LicB Macek et al., 2007
 - ManP Macek et al., 2007
 - Mdh Macek et al., 2007
 - MtlA Macek et al., 2007
 - Ndk Macek et al., 2007
 - PdhB Macek et al., 2007
 - Pgk Macek et al., 2007
 - Pgm Macek et al., 2007
 - PnbA Macek et al., 2007
 - Pnp Macek et al., 2007
 - Enzyme I Macek et al., 2007
 - Pyk Macek et al., 2007 Eymannet al., 2007
 - PyrB Macek et al., 2007
 - RsbRC Macek et al., 2007
 - RsbS Macek et al., 2007
 - RsbV Macek et al., 2007 Eymannet al., 2007
 - SpoIIAA Macek et al., 2007
 - SpoVG Macek et al., 2007
 - SrfAA Macek et al., 2007
 - SrfAB Macek et al., 2007
 - SrfAC Macek et al., 2007
 - SucC Macek et al., 2007
 - TagE Macek et al., 2007
 - Tpi Macek et al., 2007
 - TrmK Macek et al., 2007
 - Tsf Macek et al., 2007
 - YbbI Macek et al., 2007
 - YcnE Macek et al., 2007
 - YerA Macek et al., 2007
 - YfkK Macek et al., 2007
 - YpfD Macek et al., 2007
 - YpoC Macek et al., 2007
 - YqbO Macek et al., 2007
 - YtnP Macek et al., 2007
 - YwfI Macek et al., 2007
 - YwjH Macek et al., 2007
 
Phosphorylation on a Thr residue
- LtaS
 - AroA Eymannet al., 2007
 - Drm Macek et al., 2007
 - Eno Macek et al., 2007
 - FbaA Macek et al., 2007
 - FusA Macek et al., 2007
 - GndA Macek et al., 2007
 - Hbs Macek et al., 2007
 - IspU Macek et al., 2007
 - Ndk Macek et al., 2007
 - OppA Macek et al., 2007
 - Pgi Macek et al., 2007
 - Pgk Macek et al., 2007
 - PrkC Macek et al., 2007
 - PrkD Pietacket al., 2010
 - RsbR Macek et al., 2007 Eymannet al., 2007
 - RsbRB Eymannet al., 2007
 - RsbRC Macek et al., 2007
 - RsbRD Macek et al., 2007 Eymannet al., 2007
 - SodA Macek et al., 2007
 
Phosphorylation on a Tyr residue
- AhpF Macek et al., 2007
 - Asd Macek et al., 2007
 - Eno Macek et al., 2007
 - InfA Macek et al., 2007
 - Ldh Macek et al., 2007
 - OppA Macek et al., 2007
 - YjoA Macek et al., 2007
 - YnfE Macek et al., 2007
 - YorK Macek et al., 2007
 - YvyG Macek et al., 2007
 - YwqF Macek et al., 2007
 
Phosphorylation on either a Ser, Thr or Tyr residue
- AhpC Levine et al., 2007
 - AlsD Levine et al., 2007
 - AspS Levine et al., 2007
 - AtpA Levine et al., 2007
 - AtpD Levine et al., 2007
 - DnaK Eymannet al., 2007
 - DppA Levine et al., 2007
 - GapA Macek et al., 2007 Eymannet al., 2007
 - GlgP Macek et al., 2007
 - GlnA Levine et al., 2007
 - GlyA Levine et al., 2007 Eymannet al., 2007
 - GpsB Macek et al., 2007
 - GroEL Levine et al., 2007 Eymannet al., 2007
 - GtaB Levine et al., 2007
 - GuaB Eymannet al., 2007
 - Icd Levine et al., 2007 Eymannet al., 2007
 - MetE Eymannet al., 2007
 - PdxS Levine et al., 2007 Eymannet al., 2007
 - PgcA Levine et al., 2007 Eymannet al., 2007
 - PstS Levine et al., 2007
 - Pta Macek et al., 2007
 - RocA Macek et al., 2007
 - SdhA Levine et al., 2007 Eymannet al., 2007
 - SucD Macek et al., 2007
 - ThiG Eymannet al., 2007
 - Tig Levine et al., 2007
 - Tkt Levine et al., 2007
 - TufA Levine et al., 2007 Eymannet al., 2007
 - YerB Macek et al., 2007
 - YfiY Macek et al., 2007
 - YfjR Levine et al., 2007
 - YfnI Macek et al., 2007
 - YhfK Levine et al., 2007
 - YoxD Levine et al., 2007
 - YsnF Levine et al., 2007
 - YtaG Levine et al., 2007
 - YtxJ Macek et al., 2007
 - YurY Levine et al., 2007
 - YxxG Macek et al., 2007
 - Zur Levine et al., 2007
 
Related Lists
- two-component systems
 - PTS
 - PRD-containing transcription factors
 - phosphorelay
 - response regulator aspartate phosphatases
 
Original papers on the B. subtilis phosphoproteome
Reviews
Daniel C Lee, Zongchao Jia  
Emerging structural insights into bacterial tyrosine kinases. 
Trends Biochem Sci: 2009, 34(7);351-7 
[PubMed:19525115]
  [WorldCat.org]
 [DOI]
 (I p)
Mary Katherine Tarrant, Philip A Cole  
The chemical biology of protein phosphorylation. 
Annu Rev Biochem: 2009, 78;797-825 
[PubMed:19489734]
  [WorldCat.org]
 [DOI]
 (I p)
Paul G Besant, Paul V Attwood  
Detection and analysis of protein histidine phosphorylation. 
Mol Cell Biochem: 2009, 329(1-2);93-106 
[PubMed:19387796]
  [WorldCat.org]
 [DOI]
 (I p)
Emmanuelle Bechet, Sébastien Guiral, Sophie Torres, Ivan Mijakovic, Alain-Jean Cozzone, Christophe Grangeasse  
Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes. 
Amino Acids: 2009, 37(3);499-507 
[PubMed:19189200]
  [WorldCat.org]
 [DOI]
 (I p)
Boris Macek, Matthias Mann, Jesper V Olsen  
Global and site-specific quantitative phosphoproteomics: principles and applications. 
Annu Rev Pharmacol Toxicol: 2009, 49;199-221 
[PubMed:18834307]
  [WorldCat.org]
 [DOI]
 (P p)
Carsten Jers, Boumediene Soufi, Christophe Grangeasse, Josef Deutscher, Ivan Mijakovic  
Phosphoproteomics in bacteria: towards a systemic understanding of bacterial phosphorylation networks. 
Expert Rev Proteomics: 2008, 5(4);619-27 
[PubMed:18761471]
  [WorldCat.org]
 [DOI]
 (I p)
Boumediene Soufi, Carsten Jers, Mette Erichsen Hansen, Dina Petranovic, Ivan Mijakovic  
Insights from site-specific phosphoproteomics in bacteria. 
Biochim Biophys Acta: 2008, 1784(1);186-92 
[PubMed:17881301]
  [WorldCat.org]
 [DOI]
 (P p)
Christophe Grangeasse, Alain J Cozzone, Josef Deutscher, Ivan Mijakovic  
Tyrosine phosphorylation: an emerging regulatory device of bacterial physiology. 
Trends Biochem Sci: 2007, 32(2);86-94 
[PubMed:17208443]
  [WorldCat.org]
 [DOI]
 (P p)
Ivan Mijakovic, Dina Petranovic, Nunzio Bottini, Josef Deutscher, Peter Ruhdal Jensen  
Protein-tyrosine phosphorylation in Bacillus subtilis. 
J Mol Microbiol Biotechnol: 2005, 9(3-4);189-97 
[PubMed:16415592]
  [WorldCat.org]
 [DOI]
 (P p)
Josef Deutscher, Milton H Saier  
Ser/Thr/Tyr protein phosphorylation in bacteria - for long time neglected, now well established. 
J Mol Microbiol Biotechnol: 2005, 9(3-4);125-31 
[PubMed:16415586]
  [WorldCat.org]
 [DOI]
 (P p)
Liang Shi  
Manganese-dependent protein O-phosphatases in prokaryotes and their biological functions. 
Front Biosci: 2004, 9;1382-97 
[PubMed:14977554]
  [WorldCat.org]
 [DOI]
 (I e)
Alain J Cozzone, Christophe Grangeasse, Patricia Doublet, Bertrand Duclos  
Protein phosphorylation on tyrosine in bacteria. 
Arch Microbiol: 2004, 181(3);171-81 
[PubMed:14745484]
  [WorldCat.org]
 [DOI]
 (P p)
Susanne Klumpp, Josef Krieglstein  
Phosphorylation and dephosphorylation of histidine residues in proteins. 
Eur J Biochem: 2002, 269(4);1067-71 
[PubMed:11856347]
  [WorldCat.org]
 [DOI]
 (P p)
H S Cho, J G Pelton, D Yan, S Kustu, D E Wemmer  
Phosphoaspartates in bacterial signal transduction. 
Curr Opin Struct Biol: 2001, 11(6);679-84 
[PubMed:11751048]
  [WorldCat.org]
 [DOI]
 (P p)
C J Bakal, J E Davies  
No longer an exclusive club: eukaryotic signalling domains in bacteria. 
Trends Cell Biol: 2000, 10(1);32-8 
[PubMed:10603474]
  [WorldCat.org]
 [DOI]
 (P p)
P J Kennelly, M Potts  
Fancy meeting you here! A fresh look at "prokaryotic" protein phosphorylation. 
J Bacteriol: 1996, 178(16);4759-64 
[PubMed:8759835]
  [WorldCat.org]
 [DOI]
 (P p)
L N Johnson, D Barford  
The effects of phosphorylation on the structure and function of proteins. 
Annu Rev Biophys Biomol Struct: 1993, 22;199-232 
[PubMed:8347989]
  [WorldCat.org]
 [DOI]
 (P p)
R B Bourret, K A Borkovich, M I Simon  
Signal transduction pathways involving protein phosphorylation in prokaryotes. 
Annu Rev Biochem: 1991, 60;401-41 
[PubMed:1883200]
  [WorldCat.org]
 [DOI]
 (P p)