Difference between revisions of "Regulons"

From SubtiWiki
Jump to: navigation, search
(RNA switches)
(RNA switches)
 
(11 intermediate revisions by 2 users not shown)
Line 19: Line 19:
 
* [[Xpf regulon]], see also [[Xpf]]
 
* [[Xpf regulon]], see also [[Xpf]]
 
* [[YlaC regulon]], see also [[YlaC]]
 
* [[YlaC regulon]], see also [[YlaC]]
* [[YvrI-YvrHa regulon]], see also [[YvrI]] and [[YvrHa]]
+
* [[SigO-RsoA regulon]], see also [[SigO]] and [[RsoA]]
  
 
= DNA-binding regulators =
 
= DNA-binding regulators =
Line 101: Line 101:
 
* [[LmrA regulon]], see also [[LmrA]]
 
* [[LmrA regulon]], see also [[LmrA]]
 
* [[LutR regulon]], see also [[LutR]]
 
* [[LutR regulon]], see also [[LutR]]
 +
* [[LytT regulon]], see also [[LytT]]
 
* [[MalR regulon]], see also [[MalR]]
 
* [[MalR regulon]], see also [[MalR]]
 
* [[ManR regulon]], see also [[ManR]]
 
* [[ManR regulon]], see also [[ManR]]
Line 112: Line 113:
 
* [[NagR regulon]], see also [[NagR]]
 
* [[NagR regulon]], see also [[NagR]]
 
* [[NatR regulon]], see also [[NatR]]
 
* [[NatR regulon]], see also [[NatR]]
 +
* [[NrdR regulon]], see also [[NrdR]]
 
* [[NsrR regulon]], see also [[NsrR]]
 
* [[NsrR regulon]], see also [[NsrR]]
 
* [[NtdR regulon]], see also [[NtdR]]
 
* [[NtdR regulon]], see also [[NtdR]]
Line 117: Line 119:
 
* [[OpcR regulon]], see also [[OpcR]]
 
* [[OpcR regulon]], see also [[OpcR]]
 
* [[PadR regulon]], see also [[PadR]]
 
* [[PadR regulon]], see also [[PadR]]
 +
* [[PchR regulon]], see also [[YvmB]]
 
* [[PerR regulon]], see also [[PerR]]
 
* [[PerR regulon]], see also [[PerR]]
 
* [[PhoP regulon]], see also [[PhoP]]
 
* [[PhoP regulon]], see also [[PhoP]]
Line 128: Line 131:
 
* [[Rex regulon]], see also [[Rex]]
 
* [[Rex regulon]], see also [[Rex]]
 
* [[RghR regulon]], see also [[RghR]]
 
* [[RghR regulon]], see also [[RghR]]
 +
* [[RhaR regulon]], see also [[RhaR]]
 
* [[RhgR regulon]], see also [[RhgR]]
 
* [[RhgR regulon]], see also [[RhgR]]
 
* [[RocR regulon]], see also [[RocR]]
 
* [[RocR regulon]], see also [[RocR]]
Line 144: Line 148:
 
* [[Spx regulon]], see also [[Spx]]
 
* [[Spx regulon]], see also [[Spx]]
 
* [[TilS-HprT regulon]], see also [[TilS]], [[HprT]]
 
* [[TilS-HprT regulon]], see also [[TilS]], [[HprT]]
 +
* [[ThrR regulon]], see also [[ThrR]]
 
* [[TnrA regulon]], see also [[TnrA]]
 
* [[TnrA regulon]], see also [[TnrA]]
 
* [[TreR regulon]], see also [[TreR]]
 
* [[TreR regulon]], see also [[TreR]]
Line 157: Line 162:
 
* [[YetL regulon]], see also [[YetL]]
 
* [[YetL regulon]], see also [[YetL]]
 
* [[YfhP regulon]], see also [[YfhP]]
 
* [[YfhP regulon]], see also [[YfhP]]
 +
* [[YfiK regulon]], see also [[YfiK]]
 
* [[YfmP regulon]], see also [[YfmP]]
 
* [[YfmP regulon]], see also [[YfmP]]
 
* [[YkrK regulon]], see also [[YkrK]]
 
* [[YkrK regulon]], see also [[YkrK]]
Line 164: Line 170:
 
* [[YtrA regulon]], see also [[YtrA]]
 
* [[YtrA regulon]], see also [[YtrA]]
 
* [[YvrHb regulon]], see also [[YvrHb]]
 
* [[YvrHb regulon]], see also [[YvrHb]]
 +
* [[YwbI regulon]], see also [[YwbI]]
 
* [[YwcC regulon]], see also [[YwcC]]
 
* [[YwcC regulon]], see also [[YwcC]]
 
* [[YxdJ regulon]], see also [[YxdJ]]
 
* [[YxdJ regulon]], see also [[YxdJ]]
Line 171: Line 178:
  
 
* [[A-box]]
 
* [[A-box]]
 +
* [[B12 riboswitch]]
 
* [[EAR riboswitch]]
 
* [[EAR riboswitch]]
 
* [[FMN-box]]
 
* [[FMN-box]]
Line 192: Line 200:
 
* [[TRAP regulon]], see also [[MtrB]]
 
* [[TRAP regulon]], see also [[MtrB]]
 
* [[YdaO riboswitch]]
 
* [[YdaO riboswitch]]
 +
* [[YkkC riboswitch]]
 
* [[yybP-ykoY motif]]
 
* [[yybP-ykoY motif]]
 
* [[RNA switch/ other]]
 
* [[RNA switch/ other]]
 +
 +
= [[RNases]] =
 +
* [[RNase III targets]]
 +
* [[RNase Y targets]]
  
 
= Additional regulatory mechanisms =
 
= Additional regulatory mechanisms =
Line 202: Line 215:
 
* [[FbpB regulon]], see also ''[[FbpB]]''
 
* [[FbpB regulon]], see also ''[[FbpB]]''
 
* [[fsrA regulon]], see also ''[[fsrA]]''
 
* [[fsrA regulon]], see also ''[[fsrA]]''
 +
* [[Kre regulon]], see also [[Kre]]
 
* [[MifM regulon]], see also [[MifM]]
 
* [[MifM regulon]], see also [[MifM]]
 
* [[as-bsrH regulon]], see also ''[[as-bsrH]]''
 
* [[as-bsrH regulon]], see also ''[[as-bsrH]]''

Latest revision as of 09:13, 22 December 2016

Overview on the regulons in B. subtilis

Sigma factors

DNA-binding regulators

RNA switches

RNases

Additional regulatory mechanisms

Key publications