Difference between revisions of "Bcd"

From SubtiWiki
Jump to: navigation, search
m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
Line 46: Line 46:
  
 
* '''Locus tag:''' BSU24080
 
* '''Locus tag:''' BSU24080
 
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bcd_2502659_2503753_-1 Expression]
 
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 10:32, 28 January 2012

  • Description: valine dehydrogenase, isoleucine dehydrogenase, L-leucine dehydrogenase

Gene name bcd
Synonyms bkd, yqiT
Essential no
Product valine dehydrogenase, isoleucine dehydrogenase,
L-leucine dehydrogenase
Function utilization of branched-chain keto acids
Metabolic function and regulation of this protein in SubtiPathways:
Lipid synthesis, Ile, Leu, Val
MW, pI 39 kDa, 4.942
Gene length, protein length 1092 bp, 364 aa
Immediate neighbours buk, ptb
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Bcd context.gif
This image was kindly provided by SubtiList









Categories containing this gene/protein

utilization of amino acids

This gene is a member of the following regulons

BkdR regulon, CodY regulon, SigL regulon

The gene

Basic information

  • Locus tag: BSU24080

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-leucine + H2O + NAD+ = 4-methyl-2-oxopentanoate + NH3 + NADH (according to Swiss-Prot)
  • Protein family: Glu/Leu/Phe/Val dehydrogenases family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1LEH (from Lysinibacillus sphaericus, 71% identity, 82% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • induced in the presence of isoleucine or valine (BkdR) PubMed
  • Additional information:

Biological materials

  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications