Difference between revisions of "FliF"
Line 45: | Line 45: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[CodY regulon]]}}, | {{SubtiWiki regulon|[[CodY regulon]]}}, | ||
+ | {{SubtiWiki regulon|[[DegU regulon]]}}, | ||
{{SubtiWiki regulon|[[SigD regulon]]}}, | {{SubtiWiki regulon|[[SigD regulon]]}}, | ||
{{SubtiWiki regulon|[[Spo0A regulon]]}} | {{SubtiWiki regulon|[[Spo0A regulon]]}} | ||
Line 125: | Line 126: | ||
** [[CodY]]: transcription repression {{PubMed|12730172}} | ** [[CodY]]: transcription repression {{PubMed|12730172}} | ||
** [[DegU]] (non-phosphorylated): transcription activation {{PubMed|17850253}} | ** [[DegU]] (non-phosphorylated): transcription activation {{PubMed|17850253}} | ||
+ | ** [[DegU]]-P: transcription repression {{PubMed|24386445}} | ||
+ | ** [[DegU]]-P in complex with [[SwrA]]: transcription activation {{PubMed|24386445}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
Line 150: | Line 153: | ||
=References= | =References= | ||
− | <pubmed>1905667,17850253,14651647,18763711, 9657996,8157612,15175317 23190039 24296669 25313396</pubmed> | + | <pubmed>1905667,17850253,14651647,18763711, 9657996,8157612,15175317 23190039 24296669 25313396 24386445</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 15:37, 29 December 2014
- Description: flagellar basal-body M-ring protein, membrane anchor of the basal body
Gene name | fliF |
Synonyms | |
Essential | no |
Product | flagellar basal-body M-ring protein |
Function | movement and chemotaxis |
Gene expression levels in SubtiExpress: fliF | |
Interactions involving this protein in SubtInteract: FliF | |
MW, pI | 59 kDa, 4.37 |
Gene length, protein length | 1608 bp, 536 aa |
Immediate neighbours | fliE, fliG |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
motility and chemotaxis, membrane proteins
This gene is a member of the following regulons
CodY regulon, DegU regulon, SigD regulon, Spo0A regulon
The gene
Basic information
- Locus tag: BSU16210
Phenotypes of a mutant
- mucoid phenotype due to the overproduction of poly-gamma-glutamate PubMed
- no secretion of FlgM, permanent inhibition of SigD PubMed
Database entries
- BsubCyc: BSU16210
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Protein family: fliF family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- BsubCyc: BSU16210
- Structure:
- UniProt: P23447
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: flgB-flgC-fliE-fliF-fliG-fliH-fliI-fliJ-ylxF-fliK-flgD-flgE-fliL-fliM-fliY-cheY-fliZ-fliP-fliQ-fliR-flhB-flhA-flhF-flhG-cheB-cheA-cheW-cheC-cheD-sigD-swrB PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References