Difference between revisions of "CodV"

From SubtiWiki
Jump to: navigation, search
Line 30: Line 30:
  
 
<br/><br/>
 
<br/><br/>
 +
 +
= [[Categories]] containing this gene/protein =
 +
{{SubtiWiki category|[[DNA condensation/ segregation]]}}
 +
 +
= This gene is a member of the following [[regulons]] =
 +
{{SubtiWiki regulon|[[CodY regulon]]}}
  
 
=The gene=
 
=The gene=
Line 49: Line 55:
  
  
= Categories containing this gene/protein =
+
 
{{SubtiWiki category|[[DNA condensation/ segregation]]}}
 
 
=The protein=
 
=The protein=
  

Revision as of 19:38, 8 December 2010

  • Description: site-specific integrase/recombinase

Gene name codV
Synonyms
Essential no
Product site-specific integrase/recombinase
Function chromosome partitioning
MW, pI 35 kDa, 9.31
Gene length, protein length 912 bp, 304 aa
Immediate neighbours trmFO, clpQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CodV context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

DNA condensation/ segregation

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU16140

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: XerC subfamily (according to Swiss-Prot)
  • Paralogous protein(s): RipX

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References