Difference between revisions of "DNA repair/ recombination"
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{{CategoryTree | {{CategoryTree | ||
|Parents= | |Parents= | ||
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* 3.1.6. [[Genetics/ other]] | * 3.1.6. [[Genetics/ other]] | ||
|Related= | |Related= | ||
| − | + | * [[genetic competence]] | |
| + | * [[LexA regulon]] | ||
|}} | |}} | ||
== Genes in this functional category == | == Genes in this functional category == | ||
| + | === A/P endonucleases === | ||
| + | * ''[[exoA]]'' | ||
| + | * ''[[nfo]]'' | ||
| + | * ''[[nth]]'' | ||
| + | === Spore-encoded non-homologous end joining system === | ||
| + | * ''[[ligD]]'' | ||
| + | * ''[[ykoV]]'' | ||
| + | |||
| + | === Double strand breaks repair === | ||
| + | * ''[[recU]]'' | ||
| + | * ''[[ruvA]]'' | ||
| + | * ''[[ruvB]]'' | ||
| + | |||
| + | === Mismatch repair (MMR)=== | ||
| + | * ''[[dnaN]]'' | ||
| + | * ''[[mutL]]'' | ||
| + | * ''[[mutS]]'' | ||
| + | * ''[[walJ]]'' | ||
| + | |||
| + | === Oxidized guanine (GO) DNA repair system === | ||
| + | * ''[[mutM]]'' | ||
| + | * ''[[mutTA]]'' | ||
| + | * ''[[mutY]]'' | ||
| + | |||
| + | === Excision of prophages === | ||
| + | * ''[[spoIVCA]]'' | ||
| + | * ''[[sprA]]'' | ||
| + | * ''[[sprB]]'' | ||
| + | |||
| + | === Other proteins === | ||
* ''[[adaA]]'' | * ''[[adaA]]'' | ||
* ''[[adaB]]'' | * ''[[adaB]]'' | ||
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* ''[[dinG]]'' | * ''[[dinG]]'' | ||
* ''[[dprA]]'' | * ''[[dprA]]'' | ||
| − | + | ||
* ''[[fin]]'' | * ''[[fin]]'' | ||
* ''[[helD]]'' | * ''[[helD]]'' | ||
| + | * ''[[hlpB]]'' | ||
* ''[[lexA]]'' | * ''[[lexA]]'' | ||
| + | |||
* ''[[lrpC]]'' | * ''[[lrpC]]'' | ||
* ''[[mfd]]'' | * ''[[mfd]]'' | ||
| − | + | ||
| − | |||
| − | |||
* ''[[mutSB]]'' | * ''[[mutSB]]'' | ||
* ''[[mutT]]'' | * ''[[mutT]]'' | ||
| − | + | ||
| − | |||
| − | |||
| − | |||
* ''[[ogt]]'' | * ''[[ogt]]'' | ||
* ''[[pcrA]]'' | * ''[[pcrA]]'' | ||
| + | * ''[[pnpA]]'' | ||
* ''[[polA]]'' | * ''[[polA]]'' | ||
* ''[[polX]]'' | * ''[[polX]]'' | ||
| Line 50: | Line 78: | ||
* ''[[recF]]'' | * ''[[recF]]'' | ||
* ''[[recG]]'' | * ''[[recG]]'' | ||
| + | * ''[[recJ]]'' | ||
* ''[[recN]]'' | * ''[[recN]]'' | ||
* ''[[recO]]'' | * ''[[recO]]'' | ||
* ''[[recQ]]'' | * ''[[recQ]]'' | ||
* ''[[recR]]'' | * ''[[recR]]'' | ||
| − | + | ||
| − | * ''[[ | + | * ''[[recX]]'' |
| − | + | ||
* ''[[sbcC]]'' | * ''[[sbcC]]'' | ||
* ''[[sbcD]]'' | * ''[[sbcD]]'' | ||
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* ''[[splA]]'' | * ''[[splA]]'' | ||
* ''[[splB]]'' | * ''[[splB]]'' | ||
| − | + | ||
* ''[[ssbA]]'' | * ''[[ssbA]]'' | ||
| + | * ''[[ssbB]]'' | ||
* ''[[ung]]'' | * ''[[ung]]'' | ||
* ''[[uvrA]]'' | * ''[[uvrA]]'' | ||
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* ''[[uvrC]]'' | * ''[[uvrC]]'' | ||
* ''[[uvrX]]'' | * ''[[uvrX]]'' | ||
| + | |||
| + | * ''[[ywjD]]'' | ||
| + | * ''[[ywqL]]'' | ||
| + | |||
| + | == Additional candidates (based on similarity) == | ||
| + | * ''[[aag]]'' | ||
| + | * ''[[yefB]]'' | ||
| + | * ''[[yefC]]'' | ||
| + | * ''[[yfjP]]'' | ||
| + | * ''[[yhaZ]]'' | ||
| + | * ''[[yjcD]]'' | ||
| + | * ''[[yjhB]]'' | ||
| + | * ''[[yneB]]'' | ||
| + | * ''[[yobH]]'' | ||
| + | * ''[[yocI]]'' | ||
| + | |||
| + | * ''[[yorK]]'' | ||
| + | * ''[[yozK]]'' | ||
| + | * ''[[yprA]]'' | ||
| + | * ''[[ypvA]]'' | ||
| + | * ''[[yrvN]]'' | ||
| + | * ''[[yvcI]]'' | ||
| + | |||
| + | ==Key reviews== | ||
| + | <pubmed>12045091 21517913 22749141 22933559 23046409 23202527 23380520 16132081 10961463 26343983 25731766 26354434</pubmed> | ||
| + | |||
| + | ==Key original publications== | ||
| + | <pubmed> 24670664 </pubmed> | ||
| + | |||
| + | =Back to [[categories]]= | ||
Latest revision as of 16:29, 3 January 2017
| Parent categories |
|
| Neighbouring categories |
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| Related categories | |
Contents
Genes in this functional category
A/P endonucleases
Spore-encoded non-homologous end joining system
Double strand breaks repair
Mismatch repair (MMR)
Oxidized guanine (GO) DNA repair system
Excision of prophages
Other proteins
Additional candidates (based on similarity)
Key reviews
Key original publications
