Difference between revisions of "FliJ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliI]]'', ''[[ylxF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliI]]'', ''[[ylxF]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16250 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16250 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:fliJ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:fliJ_context.gif]]

Revision as of 10:14, 14 May 2013

  • Description: flagellar protein required for formation of basal body

Gene name fliJ
Synonyms cheF
Essential no
Product flagellar protein required for formation of basal body
Function movement and chemotaxis
Gene expression levels in SubtiExpress: fliJ
Interactions involving this protein in SubtInteract: FliJ
MW, pI 17 kDa, 8.409
Gene length, protein length 441 bp, 147 aa
Immediate neighbours fliI, ylxF
Sequences Protein DNA DNA_with_flanks
Genetic context
FliJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
FliJ expression.png















Categories containing this gene/protein

motility and chemotaxis, membrane proteins

This gene is a member of the following regulons

CodY regulon, SigD regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU16250

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: fliJ family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References