Difference between revisions of "UxaC"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[uxaC]]-[[yjmB]]-[[yjmC]]-[[yjmD]]-[[uxuA]]-[[yjmF]]-[[exuT]]-[[exuR]]-[[uxaB]]-[[uxaA]]'' | + | * '''Operon:''' ''[[uxaC]]-[[yjmB]]-[[yjmC]]-[[yjmD]]-[[uxuA]]-[[yjmF]]-[[exuT]]-[[exuR]]-[[uxaB]]-[[uxaA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/9882655 PubMed] |
* '''[[Sigma factor]]:''' [[SigA]] | * '''[[Sigma factor]]:''' [[SigA]] | ||
| − | * '''Regulation:''' repressed by glucose ([[CcpA]]) | + | * '''Regulation:''' |
| + | ** repressed by glucose ([[CcpA]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/9882655 PubMed] | ||
| + | ** induced by galacturonate ([[ExuR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/9882655 PubMed] | ||
| − | * '''Regulatory mechanism:''' [[CcpA]]: transcription repression | + | * '''Regulatory mechanism:''' |
| + | ** [[CcpA]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/9882655 PubMed] | ||
| + | ** [[ExuR]]: reanscription repression in the absence of inducer [http://www.ncbi.nlm.nih.gov/sites/entrez/9882655 PubMed] | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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=References= | =References= | ||
| − | + | 9579062, 9882655 | |
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] | # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] | ||
Revision as of 13:38, 30 May 2009
- Description: glucuronate isomerase (D-glucuronate, D-galacturonate)
| Gene name | uxaC |
| Synonyms | yjmA |
| Essential | no |
| Product | glucuronate isomerase (D-glucuronate, D-galacturonate) |
| Function | hexuronate utilization |
| MW, pI | 54 kDa, 5.174 |
| Gene length, protein length | 1419 bp, 473 aa |
| Immediate neighbours | ndh, yjmB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-glucuronate = D-fructuronate (according to Swiss-Prot)
- Protein family: uronate isomerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry: O34808
- KEGG entry: BSU12300
- E.C. number: 5.3.1.12
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
9579062, 9882655
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
