Difference between revisions of "CotP"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 103: Line 103:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[ydgB]]-[[ydgA]]-[[cotP]]'' (according to [http://dbtbs.hgc.jp/COG/prom/ydgBA-cotP.html DBTBS])
+
* '''Operon:''' ''[[ydgB]]-[[ydgA]]-[[cotP]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotP_601741_602172_-1 cotP] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotP_601741_602172_-1 cotP] {{PubMed|22383849}}

Revision as of 13:44, 6 April 2015

  • Description: inner spore coat protein

Gene name cotP
Synonyms ydfT
Essential no
Product inner spore coat protein
Function resistance of the spore
Gene expression levels in SubtiExpress: cotP
MW, pI 16 kDa, 4.56
Gene length, protein length 429 bp, 143 aa
Immediate neighbours ydfS, ydgA
Sequences Protein DNA DNA_with_flanks
Genetic context
CotP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CotP expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

GerE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU05550

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: small heat shock protein (HSP20) family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK, GerE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References