ydgB

ydgB
168

required for spore germination

Locus
BSU_05570
Molecular weight
9.32 kDa
Isoelectric point
3.49
Protein length
90 aaSequenceBlast
Gene length
273 bpSequenceBlast
Function
spore germination
Product
unknown
Essential
no
Synonyms
ydgB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG5911 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
602,441  602,713
Phenotypes of a mutant
impaired in spore germination PubMed
The protein
Structure
P96700 (AlphaFold)
Expression and Regulation
Operons
Genes
ydgB-ydgA-cotP
Description
PubMed
Regulation
expressed during sporulation (SigKC) PubMed
Regulatory mechanism
GerE: repression, PubMed, in gerE regulon
Sigma factors
SigK: sigma factor, PubMed, in sigK regulon
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ydgB→cotP

2025-03-27 14:19:17

Jstuelk

78

de48ea4783cd7cf077418358a047c717f33b726d

B2B75FA92D67D5FD8246AB165C9B607A031D1E77

Additional information
translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
Biological materials
Mutant
MGNA-C173 (ydgB::erm), available at the NBRP B. subtilis, Japan
BKE05570 (ydgB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCCCATCACACCCTTCCA,  downstream forward: _UP4_ATTTTAGATTAAAGGGGTTT
BKK05570 (ydgB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATCCCATCACACCCTTCCA,  downstream forward: _UP4_ATTTTAGATTAAAGGGGTTT
References
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68E585F6670539982E8E8032337DA2043C67FCC4

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Time of last update: 2025-03-29 12:05:18

Author of last update: Jstuelk