Difference between revisions of "FlgK"
| Line 36: | Line 36: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[ComK regulon]]}}, | {{SubtiWiki regulon|[[ComK regulon]]}}, | ||
| + | {{SubtiWiki regulon|[[DegU regulon]]}}, | ||
{{SubtiWiki regulon|[[SigD regulon]]}} | {{SubtiWiki regulon|[[SigD regulon]]}} | ||
| Line 99: | Line 100: | ||
** ''[[comFA]]-[[comFB]]-[[comFC]]-[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8412657}} | ** ''[[comFA]]-[[comFB]]-[[comFC]]-[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8412657}} | ||
** ''[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8045879}} | ** ''[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8045879}} | ||
| + | ** ''[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|21736639}} | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
** ''[[comFA]]'': [[SigA]] {{PubMed|8412657}} | ** ''[[comFA]]'': [[SigA]] {{PubMed|8412657}} | ||
** ''[[yvyF]]'': [[SigD]] {{PubMed|8045879}} | ** ''[[yvyF]]'': [[SigD]] {{PubMed|8045879}} | ||
| + | ** ''[[flgM]]'': [[SigD]] {{PubMed|21736639}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 108: | Line 111: | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
** [[ComK]]: transcription activation {{PubMed|8412657}} | ** [[ComK]]: transcription activation {{PubMed|8412657}} | ||
| + | ** ''[[flgM]]'': [[DegU]]-P: transcription activation {{PubMed|21736639}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 130: | Line 134: | ||
=References= | =References= | ||
| + | '''Additional publications:''' {{PubMed|21736639}} | ||
<pubmed>8412657 8045879 18957862, </pubmed> | <pubmed>8412657 8045879 18957862, </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:13, 27 July 2011
- Description: flagellar hook-associated protein 1 (HAP1)
| Gene name | flgK |
| Synonyms | |
| Essential | no |
| Product | flagellar hook-associated protein 1 (HAP1) |
| Function | movement and chemotaxis |
| MW, pI | 54 kDa, 4.375 |
| Gene length, protein length | 1521 bp, 507 aa |
| Immediate neighbours | flgL, yvyG |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
ComK regulon, DegU regulon, SigD regulon
The gene
Basic information
- Locus tag: BSU35410
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: flagella basal body rod proteins family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: secreted (according to Swiss-Prot), extracellular (no signal peptide) PubMed
Database entries
- Structure:
- UniProt: P39810
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Birgit Voigt, Haike Antelmann, Dirk Albrecht, Armin Ehrenreich, Karl-Heinz Maurer, Stefan Evers, Gerhard Gottschalk, Jan Maarten van Dijl, Thomas Schweder, Michael Hecker
Cell physiology and protein secretion of Bacillus licheniformis compared to Bacillus subtilis.
J Mol Microbiol Biotechnol: 2009, 16(1-2);53-68
[PubMed:18957862]
[WorldCat.org]
[DOI]
(I p)
D B Mirel, P Lauer, M J Chamberlin
Identification of flagellar synthesis regulatory and structural genes in a sigma D-dependent operon of Bacillus subtilis.
J Bacteriol: 1994, 176(15);4492-500
[PubMed:8045879]
[WorldCat.org]
[DOI]
(P p)
J A Londoño-Vallejo, D Dubnau
comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.
Mol Microbiol: 1993, 9(1);119-31
[PubMed:8412657]
[WorldCat.org]
[DOI]
(P p)
