Difference between revisions of "YqaM"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU26260 yqaM]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU26260 yqaM]
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YqaM YqaM]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YqaM YqaM]
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqzO]]'', ''[[yqaL]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqzO]]'', ''[[yqaL]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14567&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU26260 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU26260 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU26260 Advanced_DNA]
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yqaM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yqaM_context.gif]]

Revision as of 13:23, 13 May 2013

  • Description: similar to phage-related protein, skin-element

Gene name yqaM
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yqaM
Interactions involving this protein in SubtInteract: YqaM
MW, pI 35 kDa, 5.386
Gene length, protein length 939 bp, 313 aa
Immediate neighbours yqzO, yqaL
Sequences Protein DNA Advanced_DNA
Genetic context
YqaM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqaM expression.png
























Categories containing this gene/protein

Skin element

This gene is a member of the following regulons

SknR regulon

The gene

Basic information

  • Locus tag: BSU26260

Phenotypes of a mutant

  • overexpression of YqaM causes cell filamentation and abnormal chromosome segregation PubMed
  • overexpression of YqaM inhibits initiation DNA replication, perhaps due to the interaction with DnaC PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): XkdC

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • not expressed during normal growth (SknR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References