Difference between revisions of "AcdA"
(→Expression and regulation) |
(→Expression and regulation) |
||
Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
+ | * '''Operon:''' | ||
+ | ** ''[[fadF]]-[[acdA]]-[[rpoE]]'' {{PubMed|17189250}} | ||
+ | ** ''[[rpoE]]'' {{PubMed|10336502}} | ||
− | * ''' | + | * '''[[Sigma factor]]:''' |
− | + | ** ''[[fadF]]'': [[SigA]] {{PubMed|17189250}} | |
− | * | + | ** ''[[rpoE]]'': [[SigA]] {{PubMed|10336502}} |
* '''Regulation:''' | * '''Regulation:''' | ||
− | ** repressed in the absence of long-chain fatty acids ([[FadR]]) | + | ** ''[[fadF]]'': repressed in the absence of long-chain fatty acids ([[FadR]]) {{PubMed|17189250}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
− | ** [[FadR]]: transcription repression | + | ** [[FadR]]: transcription repression {{PubMed|17189250}} |
* '''Additional information:''' | * '''Additional information:''' |
Revision as of 19:26, 3 February 2010
- Description: acyl-CoA dehydrogenase
Gene name | acdA |
Synonyms | |
Essential | no |
Product | acyl-CoA dehydrogenase |
Function | fatty acid degradation |
MW, pI | 41 kDa, 4.951 |
Gene length, protein length | 1137 bp, 379 aa |
Immediate neighbours | rpoE, fadF |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU37170
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Acyl-CoA + ETF = 2,3-dehydroacyl-CoA + reduced ETF (according to Swiss-Prot)
- Protein family: acyl-CoA dehydrogenase family (according to Swiss-Prot)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P45867
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yasutaro Fujita, Hiroshi Matsuoka, Kazutake Hirooka
Regulation of fatty acid metabolism in bacteria.
Mol Microbiol: 2007, 66(4);829-39
[PubMed:17919287]
[WorldCat.org]
[DOI]
(P p)
Hiroshi Matsuoka, Kazutake Hirooka, Yasutaro Fujita
Organization and function of the YsiA regulon of Bacillus subtilis involved in fatty acid degradation.
J Biol Chem: 2007, 282(8);5180-94
[PubMed:17189250]
[WorldCat.org]
[DOI]
(P p)