Difference between revisions of "RNA switch"
(→Important Reviews) |
(→List of Bacillus subtilis RNAswitches) |
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* '''Protein-dependent RNA switches''' | * '''Protein-dependent RNA switches''' | ||
| + | ** [http://rfam.sanger.ac.uk/family?acc=RF00558 L20 leader]: in front of the ''[[infC]]-[[rpmI]]-[[rplT]]-[[ysdA]]'' operon: controlled by [[RplT]] binding | ||
| + | ** ''[[ptsG]]-[[ptsH]]-[[ptsI]]'': controlled by [[GlcT]] | ||
| + | ** ''[[sacX]]-[[sacY]]'', ''[[sacB]]'': controlled by [[SacY]] | ||
| + | ** ''[[sacP]]-[[sacA]]'': controlled by [[SacT]] | ||
| + | ** ''[[bglS]]'', ''[[bglP]]-[[bglH]]'': controlled by [[BglP]] | ||
*'''[[T-box]]''' | *'''[[T-box]]''' | ||
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** [http://rfam.sanger.ac.uk/family?acc=RF00555 L13 leader]: ''[[rplM]]'' | ** [http://rfam.sanger.ac.uk/family?acc=RF00555 L13 leader]: ''[[rplM]]'' | ||
** L19 leader: ''[[rplS]]'' | ** L19 leader: ''[[rplS]]'' | ||
| − | |||
** [http://rfam.sanger.ac.uk/family?acc=RF00559 L21_leader]:in front of the ''[[rplU]]-[[ysxB]]-[[rpmA]]'' operon | ** [http://rfam.sanger.ac.uk/family?acc=RF00559 L21_leader]:in front of the ''[[rplU]]-[[ysxB]]-[[rpmA]]'' operon | ||
Revision as of 19:58, 17 December 2009
RNA switches are regulatory systems that rely on alternative mRNA structures.
RNA switches may be triggered by proteins, tRNAs (T-box), or metabolites (riboswitches)
List of Bacillus subtilis RNAswitches
- Protein-dependent RNA switches
- Potential additional RNA switches
The function of these potential RNA structures is unknown. They were suggested to control the mentioned genes.
- ydaO-yuaA switch: ydaO, ktrA
- ykkC-yxkD switch: ykkC, yxkD
- yybP-ykoY switch: yybP, ykoY
- ylbH switch: ylbH
- L10 leader: rplJ
- L13 leader: rplM
- L19 leader: rplS
- L21_leader:in front of the rplU-ysxB-rpmA operon
Important Reviews
