Difference between revisions of "Sandbox"

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* '''Description:''' deoxyguanosine kinase <br/><br/>
+
* '''Description:''' deoxyadenosin/deoxycytidine kinase <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''dgk''
+
|''dck''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yaaG ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yaaF ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || deoxyguanosine kinase
+
|style="background:#ABCDEF;" align="center"| '''Product''' || deoxyadenosin/deoxycytidine kinase
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || purine salvage and interconversion
 
|style="background:#ABCDEF;" align="center"|'''Function''' || purine salvage and interconversion
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 5.783  
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 25 kDa, 5.536  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 621 bp, 207 aa  
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 651 bp, 217 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dck]]'', ''[[yaaH]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnSL-Ser1]]'', ''[[dgk]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Hier soll was neues rein'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Hier soll was neues rein'''
 
|-
 
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:dgk_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:dck_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|-
Line 43: Line 43:
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/dgk-dck.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/dgk-dck.html]
  
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10079]
+
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10078]
  
 
=== Additional information===
 
=== Additional information===
Line 80: Line 80:
 
* '''Swiss prot entry:'''
 
* '''Swiss prot entry:'''
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00150]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00140]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''
Line 89: Line 89:
  
 
* '''Operon:''' ''[[dgk]]-[[dck]]''
 
* '''Operon:''' ''[[dgk]]-[[dck]]''
 +
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
  

Revision as of 21:43, 15 April 2009

  • Description: deoxyadenosin/deoxycytidine kinase

Gene name dck
Synonyms yaaF
Essential no
Product deoxyadenosin/deoxycytidine kinase
Function purine salvage and interconversion
MW, pI 25 kDa, 5.536
Gene length, protein length 651 bp, 217 aa
Immediate neighbours trnSL-Ser1, dgk
Hier soll was neues rein
Genetic context
Dck context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed