Difference between revisions of "XynB"
| Line 93: | Line 93: | ||
* '''Operon:''' ''[[xynP]]-[[xynB]]'' | * '''Operon:''' ''[[xynP]]-[[xynB]]'' | ||
| − | * '''Sigma factor:''' [[SigA]] | + | * '''[[Sigma factor]]:''' [[SigA]] |
* '''Regulation:''' repressed by glucose ([[CcpA]]) , carbon catabolite repression ([[CcpA]]), induction by xylose ([[XylR]]) | * '''Regulation:''' repressed by glucose ([[CcpA]]) , carbon catabolite repression ([[CcpA]]), induction by xylose ([[XylR]]) | ||
Revision as of 09:49, 8 April 2009
- Description: xylan beta-1,4-xylosidase
| Gene name | xynB |
| Synonyms | ynaK |
| Essential | no |
| Product | xylan beta-1,4-xylosidase |
| Function | xylan degradation |
| MW, pI | 61 kDa, 5.326 |
| Gene length, protein length | 1599 bp, 533 aa |
| Immediate neighbours | xynP, xylR |
| Gene sequence (+200bp) | Protein sequence |
| Caution: The sequence for this gene in SubtiList contains errors | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation: repressed by glucose (CcpA) , carbon catabolite repression (CcpA), induction by xylose (XylR)
- Regulatory mechanism: CcpA: transcription repression, CcpA: transcription repression, XylR: transcription repression
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
