Difference between revisions of "SigM"

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(Genes/ operons controlled by SigB)
(Genes/ operons controlled by SigB)
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=== Genes/ operons controlled by SigB ===
 
=== Genes/ operons controlled by SigB ===
  
''[[sigM]]-[[yhdL]]-[[yhdK]]'', ''[[yqjL]]'', ''[[ypbG]]'', ''[[ydaH]]'', ''[[ypuA]]'', ''[[radC]]''
+
''[[sigM]]-[[yhdL]]-[[yhdK]]'', ''[[yqjL]]'', ''[[ypbG]]'', ''[[ydaH]]'', ''[[ypuA]]'', ''[[radC]]'', ''[[yebC]]'', ''[[ywtF]]'', ''[[rodA]]'', ''[[ypuD]]'', ''[[ytpA]]'', ''[[ytpB]]'', ''[[yngC]]'', ''[[ycgR]]'', ''[[ycgQ]]''
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 14:28, 2 March 2009

  • Description: write here

Gene name sigM
Synonyms yhdM
Essential no
Product RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma-M)
Function
MW, pI 19 kDa, 6.77
Gene length, protein length 489 bp, 163 aa
Immediate neighbours yhdL, yhdN
Gene sequence (+200bp) Protein sequence
Genetic context
SigM context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Genes/ operons controlled by SigB

sigM-yhdL-yhdK, yqjL, ypbG, ydaH, ypuA, radC, yebC, ywtF, rodA, ypuD, ytpA, ytpB, yngC, ycgR, ycgQ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

John Helmann, Cornell University, USA Homepage

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed