Difference between revisions of "Dra"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39420&redirect=T BSU39420] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/deoR-dra-nupC-pdp.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/deoR-dra-nupC-pdp.html] | ||
| Line 96: | Line 97: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39420&redirect=T BSU39420] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1MZH 1MZH] (from ''Aquifex aeolicus'', 42% identity, 62% similarity) | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1MZH 1MZH] (from ''Aquifex aeolicus'', 42% identity, 62% similarity) | ||
Revision as of 15:12, 2 April 2014
- Description: deoxyribose-phosphate aldolase
| Gene name | dra |
| Synonyms | deoC |
| Essential | no |
| Product | deoxyribose-phosphate aldolase |
| Function | utilization of nucleotides as carbon source |
| Gene expression levels in SubtiExpress: dra | |
| Metabolic function and regulation of this protein in SubtiPathways: dra | |
| MW, pI | 22 kDa, 4.926 |
| Gene length, protein length | 633 bp, 211 aa |
| Immediate neighbours | nupC, deoR |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
| Expression at a glance PubMed 500px | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39420
Phenotypes of a mutant
Database entries
- BsubCyc: BSU39420
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde (according to Swiss-Prot)
- Protein family: DeoC type 1 subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU39420
- Structure: 1MZH (from Aquifex aeolicus, 42% identity, 62% similarity)
- UniProt: P39121
- KEGG entry: [3]
- E.C. number: 4.1.2.4
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
