Difference between revisions of "YfhM"

From SubtiWiki
Jump to: navigation, search
Line 59: Line 59:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU08590&redirect=T BSU08590]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yfhKLM.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yfhKLM.html]
Line 96: Line 97:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU08590&redirect=T BSU08590]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:14, 2 April 2014

  • Description: general stress protein, similar to epoxide hydrolase

Gene name yfhM
Synonyms
Essential no
Product unknown
Function survival of ethanol stress
Gene expression levels in SubtiExpress: yfhM
MW, pI 32 kDa, 6.064
Gene length, protein length 858 bp, 286 aa
Immediate neighbours yfhL, csbB
Sequences Protein DNA DNA_with_flanks
Genetic context
YfhM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfhM expression.png
























Categories containing this gene/protein

general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), poorly characterized/ putative enzymes, sporulation proteins

This gene is a member of the following regulons

SigB regulon, SigW regulon

The gene

Basic information

  • Locus tag: BSU08590

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: AB hydrolase superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed

Expression and regulation

  • Regulatory mechanism:
  • Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References