Difference between revisions of "LiaF"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[liaS]]'', ''[[liaG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[liaS]]'', ''[[liaG]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33100 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33100 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33100 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33100 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33100 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33100 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yvqF_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yvqF_context.gif]]

Revision as of 11:14, 14 May 2013

  • Description: inhibitor of LiaS kinase activity

Gene name liaF
Synonyms yvqF
Essential no
Product negative effector of LiaS
Function control of LiaR activity
Gene expression levels in SubtiExpress: liaF
MW, pI 26 kDa, 9.211
Gene length, protein length 723 bp, 241 aa
Immediate neighbours liaS, liaG
Sequences Protein DNA DNA_with_flanks
Genetic context
YvqF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
LiaF expression.png















Categories containing this gene/protein

transcription factors and their control, resistance against oxidative and electrophile stress, resistance against toxins/ antibiotics, membrane proteins

This gene is a member of the following regulons

LiaR regulon

The gene

Basic information

  • Locus tag: BSU33100

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • inhibitor of LiaS kinase activity, maintains LiaS in the phosphatase state in the absence of the stress signal PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed