Difference between revisions of "SigG"

From SubtiWiki
Jump to: navigation, search
Line 24: Line 24:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigE]]'', ''[[ylmA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigE]]'', ''[[ylmA]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15330 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15330 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15330 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15330 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15330 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15330 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:sigG_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:sigG_context.gif]]

Revision as of 10:10, 14 May 2013

Gene name sigG
Synonyms spoIIIG
Essential no
Product RNA polymerase sporulation forespore-specific
(late) sigma factor SigG
Function transcription of sporulation genes (late forespore)
Gene expression levels in SubtiExpress: sigG
Interactions involving this protein in SubtInteract: SigG
MW, pI 29 kDa, 5.496
Gene length, protein length 780 bp, 260 aa
Immediate neighbours sigE, ylmA
Sequences Protein DNA DNA_with_flanks
Genetic context
SigG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SigG expression.png
















Categories containing this gene/protein

transcription, sigma factors and their control, sporulation proteins

This gene is a member of the following regulons

AbrB regulon, SigF regulon, SigG regulon, SinR regulon, Spo0A regulon

The SigG regulon

The gene

Basic information

  • Locus tag: BSU15330

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sigma-70 factor family (according to Swiss-Prot)
  • Paralogous protein(s): SigF

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: Gin inhibits SigG activity PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Charles Moran, Emory University, NC, USA homepage

Your additional remarks

References

Reviews

The SigG regulon

Original Publications

Additional publications: PubMed