Difference between revisions of "MetQ"

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(Extended information on the protein)
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|style="background:#ABCDEF;" align="center"|'''Function''' || methionine uptake
 
|style="background:#ABCDEF;" align="center"|'''Function''' || methionine uptake
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU32730 metQ]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32730 metQ]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/MetQ MetQ]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/MetQ MetQ]
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yurZ]]'', ''[[metP]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yurZ]]'', ''[[metP]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15264&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32730 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32730 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32730 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yusA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yusA_context.gif]]

Revision as of 13:47, 13 May 2013

Gene name metQ
Synonyms yusA
Essential no
Product methionine ABC transporter (binding lipoprotein)
Function methionine uptake
Gene expression levels in SubtiExpress: metQ
Interactions involving this protein in SubtInteract: MetQ
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 30 kDa, 8.493
Gene length, protein length 822 bp, 274 aa
Immediate neighbours yurZ, metP
Sequences Protein DNA Advanced_DNA
Genetic context
YusA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
MetQ expression.png



















Categories containing this gene/protein

ABC transporters, biosynthesis/ acquisition of amino acids, membrane proteins

This gene is a member of the following regulons

CodY regulon, S-box

The gene

Basic information

  • Locus tag: BSU32730

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YhcJ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:
    • associated to the cell membrane, via MetP PubMed
    • extracellular (signal peptide) PubMed, lipid modification as retention signal

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • activated during growth in the presence of branched chain amino acids (CodY) PubMed
    • induced by methionine starvation (S-box) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References