Difference between revisions of "SkfH"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU01980 skfH]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU01980 skfH]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.825   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.825   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[skfG]]'', ''[[ybdG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[skfG]]'', ''[[ybdG]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB11992&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU01980 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU01980 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU01980 Advanced_DNA]
 
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Revision as of 12:01, 13 May 2013

  • Description: unknown

Gene name skfH
Synonyms ybdE
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: skfH
MW, pI 16 kDa, 4.825
Gene length, protein length 423 bp, 141 aa
Immediate neighbours skfG, ybdG
Sequences Protein DNA Advanced_DNA
Genetic context
YbdE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SkfH expression.png


























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

AbrB regulon, PhoP regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU01980

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed under conditions that trigger sporulation (Spo0A) PubMed
    • repressed during logrithmic growth (AbrB) PubMed
    • induced by phosphate starvation (PhoP) PubMed
  • Additional information: Northern blotting during during phosphate limitation showed an intense 0.25 kb skfA-specific transcript, and a weaker 6.5 kb skfA-skfB-skfC-skfE-skfF-skfG-skfH transcript. PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original Publications

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