Difference between revisions of "YbfP"

From SubtiWiki
Jump to: navigation, search
m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
Line 1: Line 1:
 
+
* '''Description:''' similar to transcription regulator (AraC family) <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 13: Line 13:
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02320 ybfP]
 
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 6.285   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 6.285   
Line 28: Line 26:
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ybfP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ybfP_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
 
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybfP_251427_252314_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ybfP_expression.png|500px]]
 
 
|-
 
|-
 
|}
 
|}
  
 
__TOC__
 
__TOC__
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
  
 
<br/><br/>
 
<br/><br/>
Line 114: Line 104:
 
** ''[[ybfO]]-[[ybfP]]-[[ybfQ]]'' {{PubMed|12207695}}
 
** ''[[ybfO]]-[[ybfP]]-[[ybfQ]]'' {{PubMed|12207695}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ybfP_251427_252314_1 ybfP] {{PubMed|22383849}}
+
* '''[[Sigma factor]]:''' [[SigW]] {{PubMed|12207695}}
 
 
* '''Sigma factor:''' [[SigW]] {{PubMed|12207695}}
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 10:44, 7 August 2012

  • Description: similar to transcription regulator (AraC family)

Gene name ybfP
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 34 kDa, 6.285
Gene length, protein length 885 bp, 295 aa
Immediate neighbours ybfO, ybfQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YbfP context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transcription factors and their control, cell envelope stress proteins (controlled by SigM, V, W, X, Y)

This gene is a member of the following regulons

AbrB regulon, SigW regulon

The gene

Basic information

  • Locus tag: BSU02320

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional references: PubMed