Difference between revisions of "DapA"

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* '''Description:''' dihydrodipicolinate synthase <br/><br/>
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=[http://yxiwisewava.co.cc UNDER COSTRUCTION, PLEASE SEE THIS POST IN RESERVE COPY]=
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=[http://yxiwisewava.co.cc CLICK HERE]=
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* '''Description:''' dihydrodipicolinate synthase &lt;br/>&lt;br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of lysine and peptidoglycan
 
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of lysine and peptidoglycan
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/lys_threo.html Lys, Thr]'''
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: &lt;br/>[http://subtiwiki.uni-goettingen.de/pathways/lys_threo.html Lys, Thr]'''
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 4.928   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 4.928   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dapG]]'', ''[[rnjB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dapG]]'', ''[[rnjB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13550&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&amp;#91;EMBLCDS:CAB13550&amp;#93;+-newId sequences] &lt;br/> (Barbe ''et al.'', 2009)'''
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:dapA_context.gif]]
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|colspan="2" | '''Genetic context''' &lt;br/> [[Image:dapA_context.gif]]
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  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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  &lt;div align="right"> &lt;small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]&lt;/small>&lt;/div>
 
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__TOC__
 
__TOC__
  
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<br/><br/><br/><br/><br/><br/>
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&lt;br/>&lt;br/>&lt;br/>&lt;br/>&lt;br/>&lt;br/>
  
 
=The gene=
 
=The gene=
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=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
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* '''Catalyzed reaction/ biological activity:''' L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H<sub>2</sub>O (according to Swiss-Prot)  
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* '''Catalyzed reaction/ biological activity:''' L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H&lt;sub>2&lt;/sub>O (according to Swiss-Prot)  
  
 
* '''Protein family:''' DHDPS family (according to Swiss-Prot)
 
* '''Protein family:''' DHDPS family (according to Swiss-Prot)
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=References=
 
=References=
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<pubmed>8345520,,15699190 8098035,, </pubmed>
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&lt;pubmed>8345520,,15699190 8098035,, &lt;/pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 01:04, 24 November 2010

UNDER COSTRUCTION, PLEASE SEE THIS POST IN RESERVE COPY

CLICK HERE

  • Description: dihydrodipicolinate synthase <br/><br/>
Gene name dapA
Synonyms
Essential yes PubMed
Product dihydrodipicolinate synthase
Function biosynthesis of lysine and peptidoglycan
Metabolic function and regulation of this protein in SubtiPathways: <br/>Lys, Thr
MW, pI 30 kDa, 4.928
Gene length, protein length 870 bp, 290 aa
Immediate neighbours dapG, rnjB
Get the DNA and protein sequences <br/> (Barbe et al., 2009)
Genetic context <br/> DapA context.gif 
<div align="right"> <small>This image was kindly provided by SubtiList</small></div>

<br/><br/><br/><br/><br/><br/>

The gene

Basic information

  • Locus tag: BSU16770

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H<sub>2</sub>O (according to Swiss-Prot)
  • Protein family: DHDPS family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure: 3CPR (from Corynebacterium glutamicum, 39% identity, 58% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

<pubmed>8345520,,15699190 8098035,, </pubmed>

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