Difference between revisions of "TrmU"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[cymR]]-[[yrvO]]-[[trmU]]'' | + | * '''Operon:''' ''[[cymR]]-[[yrvO]]-[[trmU]]'' {{PubMed|16885442}} |
| − | * '''[[Sigma factor]]:''' [[SigA]] | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|16885442}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | + | <pubmed>16885442 11948165 </pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:09, 26 November 2009
- Description: tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
| Gene name | trmU |
| Synonyms | yrrA |
| Essential | yes PubMed |
| Product | tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase |
| Function | tRNA modification |
| MW, pI | 42 kDa, 4.729 |
| Gene length, protein length | 1122 bp, 374 aa |
| Immediate neighbours | yrrB, yrvO |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU27500
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: mnmA/TRMU family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O35020
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Soon-Yong Choi, Dindo Reyes, Montira Leelakriangsak, Peter Zuber
The global regulator Spx functions in the control of organosulfur metabolism in Bacillus subtilis.
J Bacteriol: 2006, 188(16);5741-51
[PubMed:16885442]
[WorldCat.org]
[DOI]
(P p)
Christine Eymann, Georg Homuth, Christian Scharf, Michael Hecker
Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.
J Bacteriol: 2002, 184(9);2500-20
[PubMed:11948165]
[WorldCat.org]
[DOI]
(P p)
