Difference between revisions of "DapA"
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* '''Operon:''' | * '''Operon:''' | ||
| + | ** ''[[spoVFA]]-[[spoVFB]]-[[asd]]-[[dapG]]-[[dapA]]'' {{PubMed|8098035}} | ||
| + | ** ''[[asd]]-[[dapG]]-[[dapA]]'' {{PubMed|8098035}} | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| + | ** ''[[spoVFA]]'': [[SigK]] {{PubMed|15699190,8098035}} | ||
| + | ** ''[[asd]]'': [[SigA]] {{PubMed|8098035}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 121: | Line 125: | ||
=References= | =References= | ||
| − | + | <pubmed>8345520,,15699190 8098035,, </pubmed> | |
| − | <pubmed>8098035,, </pubmed> | ||
| − | |||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 19:36, 16 October 2009
- Description: dihydrodipicolinate synthase
| Gene name | dapA |
| Synonyms | |
| Essential | yes PubMed |
| Product | dihydrodipicolinate synthase |
| Function | biosynthesis of lysine and peptidoglycan |
| Metabolic function and regulation of this protein in SubtiPathways: Lys, Thr | |
| MW, pI | 30 kDa, 4.928 |
| Gene length, protein length | 870 bp, 290 aa |
| Immediate neighbours | dapG, rnjB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU16770
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O (according to Swiss-Prot)
- Protein family: DHDPS family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: Q04796
- KEGG entry: [3]
- E.C. number: 4.2.1.52
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
R A Daniel, J Errington
Cloning, DNA sequence, functional analysis and transcriptional regulation of the genes encoding dipicolinic acid synthetase required for sporulation in Bacillus subtilis.
J Mol Biol: 1993, 232(2);468-83
[PubMed:8345520]
[WorldCat.org]
[DOI]
(P p)
N Y Chen, S Q Jiang, D A Klein, H Paulus
Organization and nucleotide sequence of the Bacillus subtilis diaminopimelate operon, a cluster of genes encoding the first three enzymes of diaminopimelate synthesis and dipicolinate synthase.
J Biol Chem: 1993, 268(13);9448-65
[PubMed:8098035]
[WorldCat.org]
(P p)
