Difference between revisions of "FsrA"
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* '''E.C. number:''' | * '''E.C. number:''' | ||
| + | |||
| + | === Additional information=== | ||
| + | |||
| + | =The RNA= | ||
| + | |||
| + | === Basic information/ Evolution === | ||
| + | |||
| + | * '''Catalyzed reaction/ biological activity:''' hybridizes to ''[[sdhC]]'' mRNA and inhibits [[ShdC]] translation. [http://www.ncbi.nlm.nih.gov/sites/entrez/18697947 PubMed] | ||
| + | |||
| + | === Extended information on the RNA=== | ||
| + | |||
| + | * '''Kinetic information''' | ||
| + | |||
| + | * '''Interactions:''' Binds ''[[sdhC]]'' mRNA [http://www.ncbi.nlm.nih.gov/sites/entrez/18697947 PubMed] | ||
| + | |||
| + | * '''Localization''' | ||
| + | |||
| + | === Database entries === | ||
| + | |||
| + | * '''Structure''': | ||
=== Additional information=== | === Additional information=== | ||
| Line 60: | Line 80: | ||
* '''Sigma factor:''' | * '''Sigma factor:''' | ||
| − | * '''Regulation:''' [[Fur]] | + | * '''Regulation:''' induced by iron starvation ([[Fur]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/18697947 PubMed] |
| − | * '''Regulatory mechanism:''' | + | * '''Regulatory mechanism:''' Fur: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/18697947 PubMed] |
* '''Additional information:''' | * '''Additional information:''' | ||
Revision as of 19:04, 2 March 2009
- Description: regulatory RNA
| Gene name | fsrA |
| Synonyms | |
| Essential | no |
| Product | sRNA FsrA |
| Function | inhibition of sdhC translation |
| Gene length | aaa bp |
| Immediate neighbours | ykuI, ykuJ |
| Gene sequence (+200bp) | |
Genetic context 
| |
Contents
The gene
Basic information
- Coordinates (CDS):
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: no entry
- Structure:
Additional information
- Swiss prot entry:
- KEGG entry:
- E.C. number:
Additional information
The RNA
Basic information/ Evolution
- Catalyzed reaction/ biological activity: hybridizes to sdhC mRNA and inhibits ShdC translation. PubMed
Extended information on the RNA
- Kinetic information
- Localization
Database entries
- Structure:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulatory mechanism: Fur: transcription repression PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
Labs working on this gene/RNA
Your additional remarks
References
- Gaballa A, Antelmann H, Aguilar C, Khakh SK, Song KB, Smaldone GT, Helmann JD (2008) The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins. PNAS 105: 11927-11932. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
