Difference between revisions of "SipV"

From SubtiWiki
Jump to: navigation, search
Line 36: Line 36:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 112: Line 108:
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sipV_1122175_1122681_1 sipV] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sipV_1122175_1122681_1 sipV] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 143: Line 139:
  
 
=References=
 
=References=
 
+
== Reviews ==
 +
<pubmed>22688815 </pubmed>
 +
== Original publications ==
 
<pubmed>9325333,9694797,,16267290, </pubmed>
 
<pubmed>9325333,9694797,,16267290, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 13:39, 31 July 2013

  • Description: signal peptidase I

Gene name sipV
Synonyms yhjF
Essential no
Product signal peptidase I
Function protein secretion
Gene expression levels in SubtiExpress: sipV
Metabolic function and regulation of this protein in SubtiPathways:
Protein secretion
MW, pI 18 kDa, 10.121
Gene length, protein length 504 bp, 168 aa
Immediate neighbours yhjE, yhjG
Sequences Protein DNA DNA_with_flanks
Genetic context
SipV context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SipV expression.png















Categories containing this gene/protein

protein secretion, membrane proteins

This gene is a member of the following regulons

LexA regulon

The gene

Basic information

  • Locus tag: BSU10490

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins (according to Swiss-Prot)
  • Protein family: peptidase S26 family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Jan Maarten van Dijl, Groningen, Netherlands

Your additional remarks

References

Reviews

Original publications