Difference between revisions of "YhjC"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yhjC]]-[[yhjB]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yhjCB.html DBTBS])
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* '''Operon:''' ''[[yhjC]]-[[yhjB]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yhjC_1120628_1120828_-1 yhjC] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yhjC_1120628_1120828_-1 yhjC] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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=References=
 
=References=
  
<pubmed>18083814,12618455,,12618455, 11948146  </pubmed>
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<pubmed>18083814,12618455,22383849,, 11948146  </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:50, 14 March 2014

  • Description: unknown

Gene name yhjC
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yhjC
MW, pI 7 kDa, 7.01
Gene length, protein length 198 bp, 66 aa
Immediate neighbours yhjB, yhjD
Sequences Protein DNA DNA_with_flanks
Genetic context
YhjC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YhjC expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

CodY regulon, ComK regulon

The gene

Basic information

  • Locus tag: BSU10460

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • subject to positive control by ComK PubMed
    • strongly repressed by CodY PubMed
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References