Difference between revisions of "YydJ"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yyzN]]'', ''[[yydI]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yyzN]]'', ''[[yydI]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40140 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40140 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40140 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40140 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40140 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40140 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yydJ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yydJ_context.gif]] |
Revision as of 11:43, 14 May 2013
- Description: ABC transporter (resistance), permease, export of YydF
Gene name | yydJ |
Synonyms | |
Essential | no |
Product | ABC transporter (resistance), permease |
Function | control of LiaR-LiaS activity |
Gene expression levels in SubtiExpress: yydJ | |
Interactions involving this protein in SubtInteract: YydJ | |
MW, pI | 27 kDa, 9.469 |
Gene length, protein length | 720 bp, 240 aa |
Immediate neighbours | yyzN, yydI |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
ABC transporters, transcription factors and their control, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU40140
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: Q45592
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
Additional publications: PubMed
Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. Mol Microbiol. 2011 81(6): 1459-1473. PubMed:21815947