Difference between revisions of "DltD"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dltC]]'', ''[[dltE]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dltC]]'', ''[[dltE]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38530 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38530 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:dltD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dltD_context.gif]]

Revision as of 11:37, 14 May 2013

  • Description: D-alanine transfer from undecaprenol-phosphate to the poly(glycerophosphate) chain, alanylation of teichoic acid provides some resistance against positively charged antimicrobial peptides

Gene name dltD
Synonyms ipa-2r
Essential no
Product D-alanine transfer from undecaprenol-phosphate
to the poly(glycerophosphate) chain
Function biosynthesis of teichoic acid
Gene expression levels in SubtiExpress: dltD
MW, pI 44 kDa, 9.858
Gene length, protein length 1176 bp, 392 aa
Immediate neighbours dltC, dltE
Sequences Protein DNA DNA_with_flanks
Genetic context
DltD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DltD expression.png

















Categories containing this gene/protein

cell wall synthesis, biosynthesis of cell wall components, cell envelope stress proteins (controlled by SigM, V, W, X, Y)

This gene is a member of the following regulons

SigD regulon, SigM regulon, SigX regulon, Spo0A regulon, stringent response, YvrHb regulon

The gene

Basic information

  • Locus tag: BSU38530

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
    • expression is reduced in a SigV mutant PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed