Difference between revisions of "PucL"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pucK]]'', ''[[pucM]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pucK]]'', ''[[pucM]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32450 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32450 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32450 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32450 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32450 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32450 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:pucL_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:pucL_context.gif]]

Revision as of 11:11, 14 May 2013

  • Description: uricase

Gene name pucL
Synonyms yunL
Essential no
Product uricase
Function purine utilization
Gene expression levels in SubtiExpress: pucL
Metabolic function and regulation of this protein in SubtiPathways:
Purine catabolism, Nucleotides (regulation)
MW, pI 56 kDa, 5.484
Gene length, protein length 1482 bp, 494 aa
Immediate neighbours pucK, pucM
Sequences Protein DNA DNA_with_flanks
Genetic context
PucL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PucL expression.png




























Categories containing this gene/protein

utilization of nucleotides

This gene is a member of the following regulons

PucR regulon, TnrA regulon

The gene

Basic information

  • Locus tag: BSU32450

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate = (S)-allantoin + CO2 (according to Swiss-Prot)
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1J2G (with 8-Azaxanthine from Bacillus sp., 66% identity, 79% similarity)
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
    • induced in the presence of purine nucleotides (inducer: allantoin) (PucR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References