Difference between revisions of "SivC"
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| − | * '''Description:''' | + | * '''Description:''' inhibitor of [entry into [[sporulation]] via [[KinB]] or [[KinC]] <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || inhibitor of [entry into [[sporulation]] |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || control of entry into [[sporulation]] via the [[phosphorelay]] |
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU15960 | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU15960 sivC] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 8.607 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 8.607 | ||
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<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
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| − | |||
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| − | |||
<br/><br/> | <br/><br/> | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[ | + | {{SubtiWiki category|[[phosphorelay]]}} |
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| Line 72: | Line 68: | ||
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| + | ** inhibits [[KinB]] or [[KinC]] activity {{PubMed|23335417}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
| Line 91: | Line 88: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| − | * '''[[Localization]]:''' | + | * '''[[Localization]]:''' |
| + | ** extracellular (signal peptide) [http://www.ncbi.nlm.nih.gov/pubmed/18957862 PubMed] | ||
=== Database entries === | === Database entries === | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' '' | + | * '''Operon:''' ''sivC'' {{PubMed|15033535}} |
| − | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylqB_1671166_1671651_-1 | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylqB_1671166_1671651_-1 sivC] {{PubMed|22383849}} |
| − | * '''Sigma factor:''' [[SigD]] {{PubMed|15033535}} | + | * '''[[Sigma factor]]:''' [[SigD]] {{PubMed|15033535}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 141: | Line 139: | ||
=References= | =References= | ||
| − | <pubmed>18957862 12107147, 15033535 18840696</pubmed> | + | <pubmed>18957862 12107147, 15033535 18840696 23335417 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 13:08, 1 February 2013
- Description: inhibitor of [entry into sporulation via KinB or KinC
| Gene name | ylqB |
| Synonyms | |
| Essential | no |
| Product | inhibitor of [entry into sporulation |
| Function | control of entry into sporulation via the phosphorelay |
| Gene expression levels in SubtiExpress: sivC | |
| MW, pI | 17 kDa, 8.607 |
| Gene length, protein length | 483 bp, 161 aa |
| Immediate neighbours | ftsY, ylxM |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU15960
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- extracellular (signal peptide) PubMed
Database entries
- Structure:
- UniProt: O31737
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: sivC PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
