Difference between revisions of "YjbI"
(→Extended information on the protein) |
|||
| Line 13: | Line 13: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || protection against NO, thiol redox homeostasis | |style="background:#ABCDEF;" align="center"|'''Function''' || protection against NO, thiol redox homeostasis | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU11560 yjbI] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 5.173 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 5.173 | ||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjbH]]'', ''[[cwlQ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjbH]]'', ''[[cwlQ]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11560 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11560 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11560 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yjbI_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yjbI_context.gif]] | ||
Revision as of 12:33, 13 May 2013
- Description: truncated hemoglobin, NO protection
| Gene name | yjbI |
| Synonyms | |
| Essential | no |
| Product | truncated hemoglobin |
| Function | protection against NO, thiol redox homeostasis |
| Gene expression levels in SubtiExpress: yjbI | |
| MW, pI | 14 kDa, 5.173 |
| Gene length, protein length | 396 bp, 132 aa |
| Immediate neighbours | yjbH, cwlQ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU11560
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binds sulfide with high affinity PubMed
- Protein family: protozoan/cyanobacterial globin family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information: K(D) for hydrogen sulfide = 5.0x10(6) M-1 PubMed
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1UX8
- UniProt: O31607
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
