Difference between revisions of "YwcE"
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|style="background:#ABCDEF;" align="center"|'''Function''' || required for spore morphogenesis and germination | |style="background:#ABCDEF;" align="center"|'''Function''' || required for spore morphogenesis and germination | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU38130 ywcE] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.845 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9 kDa, 9.845 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rodA]]'', ''[[qoxD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rodA]]'', ''[[qoxD]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38130 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38130 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38130 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ywcE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ywcE_context.gif]] | ||
Revision as of 14:10, 13 May 2013
- Description: holin, required for spore morphogenesis and germination
| Gene name | ywcE |
| Synonyms | ipa-41r |
| Essential | no |
| Product | holin |
| Function | required for spore morphogenesis and germination |
| Gene expression levels in SubtiExpress: ywcE | |
| MW, pI | 9 kDa, 9.845 |
| Gene length, protein length | 261 bp, 87 aa |
| Immediate neighbours | rodA, qoxD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sporulation/ other, germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38130
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ywcE family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P39603
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ywcE PubMed
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Charles Moran, Emory University, NC, USA homepage
Your additional remarks
References
Additional publications: PubMed
