Difference between revisions of "HlpB"
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| − | * '''Description:''' HNH nuclease-like protein <br/><br/> | + | * '''Description:''' HNH nuclease-like protein, rescues [[AddA]]-[[AddB]]-mediated recombination intermediates <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Product''' || HNH nuclease-like protein | |style="background:#ABCDEF;" align="center"| '''Product''' || HNH nuclease-like protein | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || rescuing of [[AddA]]-[[AddB]]-mediated recombination intermediates |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10660 yisB] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10660 yisB] | ||
Revision as of 13:06, 21 September 2012
| Gene name | hlpB |
| Synonyms | yisB |
| Essential | no |
| Product | HNH nuclease-like protein |
| Function | rescuing of AddA-AddB-mediated recombination intermediates |
| Gene expression levels in SubtiExpress: yisB | |
| MW, pI | 11 kDa, 9.941 |
| Gene length, protein length | 300 bp, 100 aa |
| Immediate neighbours | sbcC, gerPF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10660
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O06715
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Miriam Pediaditakis, Miriam Kaufenstein, Peter L Graumann
Bacillus subtilis hlpB encodes a conserved stand-alone HNH nuclease-like protein that is essential for viability unless the hlpB deletion is accompanied by the deletion of genes encoding the AddAB DNA repair complex.
J Bacteriol: 2012, 194(22);6184-94
[PubMed:22984257]
[WorldCat.org]
[DOI]
(I p)
Mitsuo Ogura, Hirotake Yamaguchi, Kazuo Kobayashi, Naotake Ogasawara, Yasutaro Fujita, Teruo Tanaka
Whole-genome analysis of genes regulated by the Bacillus subtilis competence transcription factor ComK.
J Bacteriol: 2002, 184(9);2344-51
[PubMed:11948146]
[WorldCat.org]
[DOI]
(P p)
