Difference between revisions of "YcnJ"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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{{SubtiWiki regulon|[[YcnK regulon]]}} | {{SubtiWiki regulon|[[YcnK regulon]]}} | ||
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=== Additional information=== | === Additional information=== | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycnJ_446801_448426_-1 ycnJ] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycnJ_446801_448426_-1 ycnJ] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''Sigma factor:''' [[SigA]] {{PubMed|22904286}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** | + | ** induced by copper limitation ([[YcnK]]) {{PubMed|22904286,19168619}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[YcnK]]: transcription repression | + | ** [[YcnK]]: transcription repression {{PubMed|22904286,19168619}} |
* '''Additional information:''' | * '''Additional information:''' | ||
Revision as of 08:14, 23 August 2012
- Description: copper transporter
| Gene name | ycnJ |
| Synonyms | |
| Essential | no |
| Product | copper transporter |
| Function | uptake of copper |
| Gene expression levels in SubtiExpress: ycnJ | |
| MW, pI | 59 kDa, 10.098 |
| Gene length, protein length | 1623 bp, 541 aa |
| Immediate neighbours | ycnI, ycnK |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transporters/ other, trace metal homeostasis (Cu, Zn, Ni, Mn, Mo), membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03950
Phenotypes of a mutant
growth-defective under copper-limiting conditions PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: uptake of copper PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- Structure:
- UniProt: C0SP95
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Mohamed Marahiel, Marburg University, Germany homepage
Your additional remarks
References
