Difference between revisions of "Spo0M"
| Line 13: | Line 13: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || sporulation | |style="background:#ABCDEF;" align="center"|'''Function''' || sporulation | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU08760 spo0M] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Spo0M Spo0M] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Spo0M Spo0M] | ||
| Line 23: | Line 23: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnD-Leu2]]'', ''[[ygzA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnD-Leu2]]'', ''[[ygzA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08760 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08760 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08760 Advanced_DNA] |
|- | |- | ||
|- | |- | ||
Revision as of 12:24, 13 May 2013
- Description: sporulation-control gene
| Gene name | spo0M |
| Synonyms | ygaI |
| Essential | no |
| Product | unknown |
| Function | sporulation |
| Gene expression levels in SubtiExpress: spo0M | |
| Interactions involving this protein in SubtInteract: Spo0M | |
| MW, pI | 29 kDa, 4.284 |
| Gene length, protein length | 774 bp, 258 aa |
| Immediate neighbours | trnD-Leu2, ygzA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
sporulation/ other, cell envelope stress proteins (controlled by SigM, V, W, X, Y)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU08760
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: spo0M family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
Database entries
- Structure:
- UniProt: P71088
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spo0M PubMed
- Regulation:
- Regulatory mechanism:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Min Cao, Phil A Kobel, Maud M Morshedi, Ming Fang Winston Wu, Chris Paddon, John D Helmann
Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches.
J Mol Biol: 2002, 316(3);443-57
[PubMed:11866510]
[WorldCat.org]
[DOI]
(P p)
W D Han, S Kawamoto, Y Hosoya, M Fujita, Y Sadaie, K Suzuki, Y Ohashi, F Kawamura, K Ochi
A novel sporulation-control gene (spo0M) of Bacillus subtilis with a sigmaH-regulated promoter.
Gene: 1998, 217(1-2);31-40
[PubMed:9795118]
[WorldCat.org]
[DOI]
(P p)
