Difference between revisions of "CitR"
Raphael2215 (talk | contribs) |
|||
| Line 13: | Line 13: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the minor citrate synthase | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the minor citrate synthase | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU09430 citR] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Regulatory function of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Regulatory function of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]''' | ||
| Line 23: | Line 23: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytE]]'', ''[[citA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytE]]'', ''[[citA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09430 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09430 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09430 Advanced_DNA] |
|- | |- | ||
|- | |- | ||
Revision as of 12:26, 13 May 2013
- Description: transcriptional repressor of citA
| Gene name | citR |
| Synonyms | |
| Essential | no |
| Product | transcriptional repressor (LysR family) |
| Function | regulation of the minor citrate synthase |
| Gene expression levels in SubtiExpress: citR | |
| Regulatory function of this protein in SubtiPathways: Central C-metabolism | |
| MW, pI | 35 kDa, 8.67 |
| Gene length, protein length | 924 bp, 308 aa |
| Immediate neighbours | lytE, citA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The CitR regulon:
The gene
Basic information
- Locus tag: BSU09430
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LysR family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P39127
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: citR PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
