Difference between revisions of "YknW"
(→References) |
|||
| Line 1: | Line 1: | ||
| − | * '''Description:''' ABC | + | * '''Description:''' modulates assembly of the [[YknX]]-[[YknY]]-[[YknZ]] [[ABC transporter]] for the export of the [[SdpC]] toxin<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || ABC | + | |style="background:#ABCDEF;" align="center"| '''Product''' || modulator of [[ABC transporter]] assembly |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || resistence against [[SdpC]] toxin | |style="background:#ABCDEF;" align="center"|'''Function''' || resistence against [[SdpC]] toxin | ||
| + | |- | ||
| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YknW YknW] | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 24 kDa, 6.94 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 24 kDa, 6.94 | ||
| Line 64: | Line 66: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| Line 91: | Line 91: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| + | ** [[YknW]]-([[YknX]]-([[YknY]]-[[YknZ]]) {{PubMed|22707703}} | ||
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot), membrane [http://www.ncbi.nlm.nih.gov/pubmed/18763711 PubMed] | * '''[[Localization]]:''' cell membrane (according to Swiss-Prot), membrane [http://www.ncbi.nlm.nih.gov/pubmed/18763711 PubMed] | ||
Revision as of 14:42, 19 June 2012
- Description: modulates assembly of the YknX-YknY-YknZ ABC transporter for the export of the SdpC toxin
| Gene name | yknW |
| Synonyms | |
| Essential | no |
| Product | modulator of ABC transporter assembly |
| Function | resistence against SdpC toxin |
| Interactions involving this protein in SubtInteract: YknW | |
| MW, pI | 24 kDa, 6.94 |
| Gene length, protein length | 693 bp, 231 aa |
| Immediate neighbours | yknV, yknX |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
ABC transporters, cell envelope stress proteins (controlled by SigM, V, W, X, Y), resistance against toxins/ antibiotics, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU14340
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot), membrane PubMed
Database entries
- Structure:
- UniProt: O31709
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711]
[WorldCat.org]
[DOI]
(I p)
Bronwyn G Butcher, John D Helmann
Identification of Bacillus subtilis sigma-dependent genes that provide intrinsic resistance to antimicrobial compounds produced by Bacilli.
Mol Microbiol: 2006, 60(3);765-82
[PubMed:16629676]
[WorldCat.org]
[DOI]
(P p)
Qiang Qian, Chien Y Lee, John D Helmann, Mark A Strauch
AbrB is a regulator of the sigma(W) regulon in Bacillus subtilis.
FEMS Microbiol Lett: 2002, 211(2);219-23
[PubMed:12076816]
[WorldCat.org]
[DOI]
(P p)
X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136]
[WorldCat.org]
[DOI]
(P p)
