Difference between revisions of "SnaB"

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|colspan="2" | '''Genetic context''' <br/> [[Image:yxeL_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yxeL_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxeL_4060307_4060804_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yxeL_expression.png|500px]]
 
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Revision as of 12:33, 23 April 2012

  • Description: unknown

Gene name yxeL
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 18 kDa, 9.125
Gene length, protein length 495 bp, 165 aa
Immediate neighbours yxeM, yxeK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxeL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxeL expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

CymR regulon

The gene

Basic information

  • Locus tag: BSU39510

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: acetyltransferase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the presence of cysteine (CymR) PubMed
  • Regulatory mechanism:
  • Additional information:
    • the amount of the mRNA is substantially decreased upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J  
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. 
Mol Microbiol. 2011 81(6): 1459-1473. 
PubMed:21815947