Difference between revisions of "YlxS"

From SubtiWiki
Jump to: navigation, search
(Extended information on the protein)
Line 43: Line 43:
  
 
* '''Locus tag:''' BSU16590
 
* '''Locus tag:''' BSU16590
 +
 +
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylxS_1731776_1732246_1 Expression]
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 09:47, 25 January 2012

  • Description: similar to 30S ribosomal subunit maturation protein


Gene name ylxS
Synonyms ymxA
Essential no
Product unknown
Function ribosome maturation
MW, pI 17 kDa, 4.482
Gene length, protein length 468 bp, 156 aa
Immediate neighbours polC, nusA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlxS context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

translation

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU16590

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0090 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:
    • The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References