Difference between revisions of "YwbO"
| Line 35: | Line 35: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | {{SubtiWiki regulon|[[SigM regulon]]}}, | |
| + | {{SubtiWiki regulon|[[SigW regulon]]}}, | ||
| + | {{SubtiWiki regulon|[[SigX regulon]]}} | ||
=The gene= | =The gene= | ||
| Line 96: | Line 98: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''ywbO'' {{PubMed|9353933}} | + | * '''Operon:''' |
| + | ** ''ywbO'' {{PubMed|9353933}} | ||
| + | ** ''[[ywbN]]-[[ywbO]]'' {{PubMed|18179421}} | ||
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' |
| + | ** ''[[ywbN]]'': [[SigM]] {{PubMed|18179421}}, [[SigX]], [[SigW]] {{PubMed|9683469}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 125: | Line 130: | ||
=References= | =References= | ||
| − | <pubmed>9353933 | + | <pubmed>9353933 18179421 9683469 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:21, 18 May 2011
- Description: unknown
| Gene name | ywbO |
| Synonyms | ipa-30d |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 22 kDa, 4.641 |
| Gene length, protein length | 600 bp, 200 aa |
| Immediate neighbours | ywcA, ywbN |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
cell envelope stress proteins (controlled by SigM, W, X, Y)
This gene is a member of the following regulons
SigM regulon, SigW regulon, SigX regulon
The gene
Basic information
- Locus tag: BSU38250
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P39598
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421]
[WorldCat.org]
[DOI]
(P p)
X Huang, K L Fredrick, J D Helmann
Promoter recognition by Bacillus subtilis sigmaW: autoregulation and partial overlap with the sigmaX regulon.
J Bacteriol: 1998, 180(15);3765-70
[PubMed:9683469]
[WorldCat.org]
[DOI]
(P p)
E Presecan, I Moszer, L Boursier, H Cruz Ramos, V de la Fuente, M-F Hullo, C Lelong, S Schleich, A Sekowska, B H Song, G Villani, F Kunst, A Danchin, P Glaser
The Bacillus subtilis genome from gerBC (311 degrees) to licR (334 degrees).
Microbiology (Reading): 1997, 143 ( Pt 10);3313-3328
[PubMed:9353933]
[WorldCat.org]
[DOI]
(P p)
