Difference between revisions of "PdaA"
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* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|12374835,15699190}} | * '''[[Sigma factor]]:''' [[SigG]] {{PubMed|12374835,15699190}} | ||
| − | * '''Regulation:''' expressed during sporulation ([[SigG]]) {{PubMed|12374835,15699190}} | + | * '''Regulation:''' expressed late during sporulation in the forespore ([[SigG]]) {{PubMed|12374835,15699190}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 17:32, 14 May 2010
- Description: polysaccharide deacetylase, required for germination
| Gene name | pdaA |
| Synonyms | yfjS |
| Essential | no |
| Product | polysaccharide deacetylase |
| Function | germination |
| MW, pI | 29 kDa, 7.318 |
| Gene length, protein length | 789 bp, 263 aa |
| Immediate neighbours | yfjT, yfjR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU07980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1W17
- UniProt: O34928
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: pdaA PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
