Difference between revisions of "SP-beta prophage"
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{{CategoryTree | {{CategoryTree | ||
|Parents= | |Parents= | ||
− | * 5. Prophages and mobile genetic elements | + | * 5. [[Prophages and mobile genetic elements]] |
− | ** 5.1. Prophages | + | ** 5.1. [[Prophages]] |
|Neighbours= | |Neighbours= | ||
* 5.1.1. [[PBSX prophage]] | * 5.1.1. [[PBSX prophage]] | ||
* 5.1.2. [[SPß prophage]] | * 5.1.2. [[SPß prophage]] | ||
* 5.1.3. [[Skin element]] | * 5.1.3. [[Skin element]] | ||
− | * 5.1.4. [[Phage-related functions]] | + | * 5.1.4. [[Prophage 1]] |
+ | * 5.1.5. [[Prophage 3]] | ||
+ | * 5.1.6. [[Phage-related functions]] | ||
|Related= | |Related= | ||
none | none | ||
|}} | |}} | ||
+ | |||
+ | == Important notes== | ||
+ | * In 168, SP-beta disrupts the ''[[ypqP]]'' gene | ||
+ | * A strain devoid of [[PBSX prophage]] , [[SP-beta prophage]] and the [[Skin element]] (TF8A) as well as a strain devoid of all six prophages of the 168 genome (D6) is available in [[Jan Maarten van Dijl]]'s lab {{PubMed|12949151}} | ||
+ | |||
+ | == Genes in this functional category == | ||
+ | * ''[[as-yonT]]'' | ||
+ | * ''[[bdbA]]'' | ||
+ | * ''[[bdbB]]'' | ||
+ | * ''[[bhlA]]'' | ||
+ | * ''[[bhlB]]'' | ||
+ | * ''[[blyA]]'' | ||
+ | * ''[[bsrG]]'' | ||
+ | * ''[[cwlP]]'' | ||
+ | * ''[[ligB]]'' | ||
+ | * ''[[mtbP]]'' | ||
+ | * ''[[nonA]]'' | ||
+ | * ''[[nrdEB]]'' | ||
+ | * ''[[pghZ]]'' | ||
+ | * ''[[sprA]]'' | ||
+ | * ''[[sprB]]'' | ||
+ | * ''[[SR4]]'' | ||
+ | * ''[[sspC]]'' | ||
+ | * ''[[sunA]]'' | ||
+ | * ''[[sunI]]'' | ||
+ | * ''[[sunS]]'' | ||
+ | * ''[[sunT]]'' | ||
+ | * ''[[uvrX]]'' | ||
+ | * ''[[yojW]]'' | ||
+ | * ''[[yokB]]'' | ||
+ | * ''[[yokC]]'' | ||
+ | * ''[[yokD]]'' | ||
+ | * ''[[yokE]]'' | ||
+ | * ''[[yokF]]'' | ||
+ | * ''[[yokG]]'' | ||
+ | * ''[[yokH]]'' | ||
+ | * ''[[yokI]]'' | ||
+ | * ''[[yokJ]]'' | ||
+ | * ''[[yokK]]'' | ||
+ | * ''[[yokL]]'' | ||
+ | * ''[[yolA]]'' | ||
+ | * ''[[yolB]]'' | ||
+ | * ''[[yolC]]'' | ||
+ | * ''[[yolD]]'' | ||
+ | * ''[[yomD]]'' | ||
+ | * ''[[yomE]]'' | ||
+ | * ''[[yomF]]'' | ||
+ | * ''[[yomG]]'' | ||
+ | * ''[[yomH]]'' | ||
+ | * ''[[yomJ]]'' | ||
+ | * ''[[yomK]]'' | ||
+ | * ''[[yomL]]'' | ||
+ | * ''[[yomM]]'' | ||
+ | * ''[[yomN]]'' | ||
+ | * ''[[yomO]]'' | ||
+ | * ''[[yomP]]'' | ||
+ | * ''[[yomQ]]'' | ||
+ | * ''[[yomR]]'' | ||
+ | * ''[[yomS]]'' | ||
+ | * ''[[yomT]]'' | ||
+ | * ''[[yomU]]'' | ||
+ | * ''[[yomV]]'' | ||
+ | * ''[[yomW]]'' | ||
+ | * ''[[yomX]]'' | ||
+ | * ''[[yomY]]'' | ||
+ | * ''[[yomZ]]'' | ||
+ | * ''[[yonA]]'' | ||
+ | * ''[[yonB]]'' | ||
+ | * ''[[yonC]]'' | ||
+ | * ''[[yonD]]'' | ||
+ | * ''[[yonE]]'' | ||
+ | * ''[[yonF]]'' | ||
+ | * ''[[yonG]]'' | ||
+ | * ''[[yonH]]'' | ||
+ | * ''[[yonI]]'' | ||
+ | * ''[[yonJ]]'' | ||
+ | * ''[[yonK]]'' | ||
+ | * ''[[yonN]]'' | ||
+ | * ''[[yonO]]'' | ||
+ | * ''[[yonP]]'' | ||
+ | * ''[[yonR]]'' | ||
+ | * ''[[yonS]]'' | ||
+ | * ''[[yonT]]'' | ||
+ | * ''[[yonU]]'' | ||
+ | * ''[[yonV]]'' | ||
+ | * ''[[yonX]]'' | ||
+ | * ''[[yopA]]'' | ||
+ | * ''[[yopB]]'' | ||
+ | * ''[[yopC]]'' | ||
+ | * ''[[yopD]]'' | ||
+ | * ''[[yopE]]'' | ||
+ | * ''[[yopF]]'' | ||
+ | * ''[[yopG]]'' | ||
+ | * ''[[yopH]]'' | ||
+ | * ''[[yopI]]'' | ||
+ | * ''[[yopJ]]'' | ||
+ | * ''[[yopK]]'' | ||
+ | * ''[[yopL]]'' | ||
+ | * ''[[yopM]]'' | ||
+ | * ''[[yopN]]'' | ||
+ | * ''[[yopO]]'' | ||
+ | * ''[[yopP]]'' | ||
+ | * ''[[yopQ]]'' | ||
+ | * ''[[yopR]]'' | ||
+ | * ''[[yopS]]'' | ||
+ | * ''[[yopT]]'' | ||
+ | * ''[[yopU]]'' | ||
+ | * ''[[yopV]]'' | ||
+ | * ''[[yopW]]'' | ||
+ | * ''[[yopX]]'' | ||
+ | * ''[[yopY]]'' | ||
+ | * ''[[yopZ]]'' | ||
+ | * ''[[yoqA]]'' | ||
+ | * ''[[yoqB]]'' | ||
+ | * ''[[yoqC]]'' | ||
+ | * ''[[yoqD]]'' | ||
+ | * ''[[yoqE]]'' | ||
+ | * ''[[yoqF]]'' | ||
+ | * ''[[yoqG]]'' | ||
+ | * ''[[yoqH]]'' | ||
+ | * ''[[yoqI]]'' | ||
+ | * ''[[yoqJ]]'' | ||
+ | * ''[[yoqK]]'' | ||
+ | * ''[[yoqL]]'' | ||
+ | * ''[[yoqM]]'' | ||
+ | * ''[[yoqN]]'' | ||
+ | * ''[[yoqO]]'' | ||
+ | * ''[[yoqP]]'' | ||
+ | * ''[[yoqR]]'' | ||
+ | * ''[[yoqS]]'' | ||
+ | * ''[[yoqT]]'' | ||
+ | * ''[[yoqU]]'' | ||
+ | * ''[[yoqW]]'' | ||
+ | * ''[[yoqX]]'' | ||
+ | * ''[[yoqY]]'' | ||
+ | |||
+ | * ''[[yorA]]'' | ||
+ | * ''[[yorB]]'' | ||
+ | * ''[[yorC]]'' | ||
+ | * ''[[yorD]]'' | ||
+ | * ''[[yorE]]'' | ||
+ | * ''[[yorF]]'' | ||
+ | * ''[[yorG]]'' | ||
+ | * ''[[yorH]]'' | ||
+ | * ''[[yorI]]'' | ||
+ | * ''[[yorJ]]'' | ||
+ | * ''[[yorK]]'' | ||
+ | * ''[[yorL]]'' | ||
+ | * ''[[yorM]]'' | ||
+ | * ''[[yorN]]'' | ||
+ | * ''[[yorO]]'' | ||
+ | * ''[[yorP]]'' | ||
+ | * ''[[yorQ]]'' | ||
+ | * ''[[yorR]]'' | ||
+ | * ''[[yorS]]'' | ||
+ | * ''[[yorT]]'' | ||
+ | * ''[[yorV]]'' | ||
+ | * ''[[yorW]]'' | ||
+ | * ''[[yorX]]'' | ||
+ | * ''[[yorY]]'' | ||
+ | * ''[[yorZ]]'' | ||
+ | * ''[[yosA]]'' | ||
+ | * ''[[yosB]]'' | ||
+ | * ''[[yosC]]'' | ||
+ | * ''[[yosD]]'' | ||
+ | * ''[[yosE]]'' | ||
+ | * ''[[yosF]]'' | ||
+ | * ''[[yosG]]'' | ||
+ | * ''[[yosH]]'' | ||
+ | * ''[[yosI]]'' | ||
+ | * ''[[yosJ]]'' | ||
+ | * ''[[yosK]]'' | ||
+ | * ''[[yosL]]'' | ||
+ | * ''[[yosM]]'' | ||
+ | * ''[[yosP]]'' | ||
+ | * ''[[yosQ]]'' | ||
+ | * ''[[yosR]]'' | ||
+ | * ''[[yosS]]'' | ||
+ | * ''[[yosT]]'' | ||
+ | * ''[[yosU]]'' | ||
+ | * ''[[yosV]]'' | ||
+ | * ''[[yosW]]'' | ||
+ | * ''[[yosX]]'' | ||
+ | * ''[[yotB]]'' | ||
+ | * ''[[yotC]]'' | ||
+ | * ''[[yotD]]'' | ||
+ | * ''[[yotE]]'' | ||
+ | * ''[[yotF]]'' | ||
+ | * ''[[yotG]]'' | ||
+ | * ''[[yotH]]'' | ||
+ | * ''[[yotI]]'' | ||
+ | * ''[[yotJ]]'' | ||
+ | * ''[[yotK]]'' | ||
+ | * ''[[yotL]]'' | ||
+ | * ''[[yotM]]'' | ||
+ | * ''[[youA]]'' | ||
+ | * ''[[youB]]'' | ||
+ | * ''[[yoyH]]'' | ||
+ | * ''[[yoyI]]'' | ||
+ | * ''[[yoyJ]]'' | ||
+ | * ''[[yoyK/1]]'' | ||
+ | * ''[[yoyK/2]]'' | ||
+ | * ''[[yozP]]'' | ||
+ | |||
+ | ==Key publications== | ||
+ | <pubmed> 9781889 10376821 12949151 34100162 </pubmed> | ||
+ | |||
+ | =Back to [[categories]]= |
Latest revision as of 09:20, 17 June 2021
Parent categories | |
Neighbouring categories |
|
Related categories |
none |
Contents
Important notes
- In 168, SP-beta disrupts the ypqP gene
- A strain devoid of PBSX prophage , SP-beta prophage and the Skin element (TF8A) as well as a strain devoid of all six prophages of the 168 genome (D6) is available in Jan Maarten van Dijl's lab PubMed
Genes in this functional category
- as-yonT
- bdbA
- bdbB
- bhlA
- bhlB
- blyA
- bsrG
- cwlP
- ligB
- mtbP
- nonA
- nrdEB
- pghZ
- sprA
- sprB
- SR4
- sspC
- sunA
- sunI
- sunS
- sunT
- uvrX
- yojW
- yokB
- yokC
- yokD
- yokE
- yokF
- yokG
- yokH
- yokI
- yokJ
- yokK
- yokL
- yolA
- yolB
- yolC
- yolD
- yomD
- yomE
- yomF
- yomG
- yomH
- yomJ
- yomK
- yomL
- yomM
- yomN
- yomO
- yomP
- yomQ
- yomR
- yomS
- yomT
- yomU
- yomV
- yomW
- yomX
- yomY
- yomZ
- yonA
- yonB
- yonC
- yonD
- yonE
- yonF
- yonG
- yonH
- yonI
- yonJ
- yonK
- yonN
- yonO
- yonP
- yonR
- yonS
- yonT
- yonU
- yonV
- yonX
- yopA
- yopB
- yopC
- yopD
- yopE
- yopF
- yopG
- yopH
- yopI
- yopJ
- yopK
- yopL
- yopM
- yopN
- yopO
- yopP
- yopQ
- yopR
- yopS
- yopT
- yopU
- yopV
- yopW
- yopX
- yopY
- yopZ
- yoqA
- yoqB
- yoqC
- yoqD
- yoqE
- yoqF
- yoqG
- yoqH
- yoqI
- yoqJ
- yoqK
- yoqL
- yoqM
- yoqN
- yoqO
- yoqP
- yoqR
- yoqS
- yoqT
- yoqU
- yoqW
- yoqX
- yoqY
- yorA
- yorB
- yorC
- yorD
- yorE
- yorF
- yorG
- yorH
- yorI
- yorJ
- yorK
- yorL
- yorM
- yorN
- yorO
- yorP
- yorQ
- yorR
- yorS
- yorT
- yorV
- yorW
- yorX
- yorY
- yorZ
- yosA
- yosB
- yosC
- yosD
- yosE
- yosF
- yosG
- yosH
- yosI
- yosJ
- yosK
- yosL
- yosM
- yosP
- yosQ
- yosR
- yosS
- yosT
- yosU
- yosV
- yosW
- yosX
- yotB
- yotC
- yotD
- yotE
- yotF
- yotG
- yotH
- yotI
- yotJ
- yotK
- yotL
- yotM
- youA
- youB
- yoyH
- yoyI
- yoyJ
- yoyK/1
- yoyK/2
- yozP
Key publications